Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC37.64■■■■□ 3.62
SNAPC4Q5SXM2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC37.63■■■■□ 3.62
SNAPC4Q5SXM2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC37.63■■■■□ 3.61
SNAPC4Q5SXM2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC37.63■■■■□ 3.61
SNAPC4Q5SXM2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC37.63■■■■□ 3.61
SNAPC4Q5SXM2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC37.63■■■■□ 3.61
SNAPC4Q5SXM2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC37.63■■■■□ 3.61
SNAPC4Q5SXM2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC37.62■■■■□ 3.61
SNAPC4Q5SXM2 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC37.62■■■■□ 3.61
SNAPC4Q5SXM2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC37.62■■■■□ 3.61
SNAPC4Q5SXM2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC37.62■■■■□ 3.61
SNAPC4Q5SXM2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC37.62■■■■□ 3.61
SNAPC4Q5SXM2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC37.62■■■■□ 3.61
SNAPC4Q5SXM2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC37.61■■■■□ 3.61
SNAPC4Q5SXM2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC37.61■■■■□ 3.61
SNAPC4Q5SXM2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC37.61■■■■□ 3.61
SNAPC4Q5SXM2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC37.61■■■■□ 3.61
SNAPC4Q5SXM2 AL022069.1-201ENST00000568025 1636 ntBASIC37.61■■■■□ 3.61
SNAPC4Q5SXM2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC37.61■■■■□ 3.61
SNAPC4Q5SXM2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC37.6■■■■□ 3.61
SNAPC4Q5SXM2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
SNAPC4Q5SXM2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
SNAPC4Q5SXM2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC37.6■■■■□ 3.61
SNAPC4Q5SXM2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
SNAPC4Q5SXM2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC37.6■■■■□ 3.61
SNAPC4Q5SXM2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC37.6■■■■□ 3.61
SNAPC4Q5SXM2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC37.6■■■■□ 3.61
SNAPC4Q5SXM2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
SNAPC4Q5SXM2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC37.59■■■■□ 3.61
SNAPC4Q5SXM2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC37.59■■■■□ 3.61
SNAPC4Q5SXM2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC37.59■■■■□ 3.61
SNAPC4Q5SXM2 AC010501.1-201ENST00000606270 1962 ntBASIC37.59■■■■□ 3.61
SNAPC4Q5SXM2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC37.58■■■■□ 3.61
SNAPC4Q5SXM2 AL355802.2-201ENST00000402069 882 ntBASIC37.58■■■■□ 3.61
SNAPC4Q5SXM2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC37.58■■■■□ 3.61
SNAPC4Q5SXM2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC37.58■■■■□ 3.61
SNAPC4Q5SXM2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC37.58■■■■□ 3.61
SNAPC4Q5SXM2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC37.58■■■■□ 3.61
SNAPC4Q5SXM2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
SNAPC4Q5SXM2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC37.58■■■■□ 3.61
SNAPC4Q5SXM2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC37.58■■■■□ 3.61
SNAPC4Q5SXM2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC37.58■■■■□ 3.61
SNAPC4Q5SXM2 PPP1R14BP3-201ENST00000509033 445 ntBASIC37.58■■■■□ 3.61
SNAPC4Q5SXM2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC37.58■■■■□ 3.61
SNAPC4Q5SXM2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC37.58■■■■□ 3.61
SNAPC4Q5SXM2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC37.57■■■■□ 3.61
SNAPC4Q5SXM2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC37.57■■■■□ 3.6
SNAPC4Q5SXM2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC37.57■■■■□ 3.6
SNAPC4Q5SXM2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC37.56■■■■□ 3.6
SNAPC4Q5SXM2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
SNAPC4Q5SXM2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC37.56■■■■□ 3.6
SNAPC4Q5SXM2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
SNAPC4Q5SXM2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC37.56■■■■□ 3.6
SNAPC4Q5SXM2 NT5C3AP1-201ENST00000394500 1012 ntBASIC37.56■■■■□ 3.6
SNAPC4Q5SXM2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC37.56■■■■□ 3.6
SNAPC4Q5SXM2 MIR6089-201ENST00000616698 64 ntBASIC37.56■■■■□ 3.6
SNAPC4Q5SXM2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
SNAPC4Q5SXM2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC37.56■■■■□ 3.6
SNAPC4Q5SXM2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
SNAPC4Q5SXM2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC37.55■■■■□ 3.6
SNAPC4Q5SXM2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC37.55■■■■□ 3.6
SNAPC4Q5SXM2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC37.55■■■■□ 3.6
SNAPC4Q5SXM2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC37.54■■■■□ 3.6
SNAPC4Q5SXM2 MAP2K4P1-201ENST00000438453 1195 ntBASIC37.54■■■■□ 3.6
SNAPC4Q5SXM2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC37.54■■■■□ 3.6
SNAPC4Q5SXM2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC37.54■■■■□ 3.6
SNAPC4Q5SXM2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC37.53■■■■□ 3.6
SNAPC4Q5SXM2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC37.53■■■■□ 3.6
SNAPC4Q5SXM2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
SNAPC4Q5SXM2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC37.53■■■■□ 3.6
SNAPC4Q5SXM2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC37.53■■■■□ 3.6
SNAPC4Q5SXM2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC37.53■■■■□ 3.6
SNAPC4Q5SXM2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC37.53■■■■□ 3.6
SNAPC4Q5SXM2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC37.52■■■■□ 3.6
SNAPC4Q5SXM2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC37.52■■■■□ 3.6
SNAPC4Q5SXM2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC37.52■■■■□ 3.6
SNAPC4Q5SXM2 AC010525.1-201ENST00000585559 441 ntBASIC37.52■■■■□ 3.6
SNAPC4Q5SXM2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC37.52■■■■□ 3.6
SNAPC4Q5SXM2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC37.52■■■■□ 3.6
SNAPC4Q5SXM2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC37.52■■■■□ 3.6
SNAPC4Q5SXM2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC37.52■■■■□ 3.6
SNAPC4Q5SXM2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC37.51■■■■□ 3.6
SNAPC4Q5SXM2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC37.51■■■■□ 3.6
SNAPC4Q5SXM2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC37.51■■■■□ 3.6
SNAPC4Q5SXM2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC37.51■■■■□ 3.6
SNAPC4Q5SXM2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC37.51■■■■□ 3.6
SNAPC4Q5SXM2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC37.51■■■■□ 3.6
SNAPC4Q5SXM2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC37.51■■■■□ 3.59
SNAPC4Q5SXM2 CROCCP5-201ENST00000436658 830 ntBASIC37.51■■■■□ 3.59
SNAPC4Q5SXM2 AP005435.1-201ENST00000529293 1178 ntBASIC37.51■■■■□ 3.59
SNAPC4Q5SXM2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC37.5■■■■□ 3.59
SNAPC4Q5SXM2 GAS2L1P2-201ENST00000436355 1356 ntBASIC37.5■■■■□ 3.59
SNAPC4Q5SXM2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC37.5■■■■□ 3.59
SNAPC4Q5SXM2 AC026185.1-201ENST00000445748 174 ntBASIC37.5■■■■□ 3.59
SNAPC4Q5SXM2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC37.5■■■■□ 3.59
SNAPC4Q5SXM2 AC137761.2-201ENST00000561729 223 ntBASIC37.5■■■■□ 3.59
SNAPC4Q5SXM2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC37.5■■■■□ 3.59
SNAPC4Q5SXM2 AC145350.3-201ENST00000569033 163 ntBASIC37.5■■■■□ 3.59
SNAPC4Q5SXM2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC37.5■■■■□ 3.59
SNAPC4Q5SXM2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC37.5■■■■□ 3.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms