Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TMEM35AQ53FP2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM35AQ53FP2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM35AQ53FP2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.49■■□□□ 1.03
TMEM35AQ53FP2 DUSP8P5-201ENST00000422884 1815 ntBASIC21.49■■□□□ 1.03
TMEM35AQ53FP2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM35AQ53FP2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM35AQ53FP2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM35AQ53FP2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM35AQ53FP2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TMEM35AQ53FP2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM35AQ53FP2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TMEM35AQ53FP2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.48■■□□□ 1.03
TMEM35AQ53FP2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM35AQ53FP2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.48■■□□□ 1.03
TMEM35AQ53FP2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM35AQ53FP2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM35AQ53FP2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TMEM35AQ53FP2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TMEM35AQ53FP2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.48■■□□□ 1.03
TMEM35AQ53FP2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.48■■□□□ 1.03
TMEM35AQ53FP2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM35AQ53FP2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM35AQ53FP2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.47■■□□□ 1.03
TMEM35AQ53FP2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.47■■□□□ 1.03
TMEM35AQ53FP2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
TMEM35AQ53FP2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.47■■□□□ 1.03
TMEM35AQ53FP2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM35AQ53FP2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM35AQ53FP2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.47■■□□□ 1.03
TMEM35AQ53FP2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM35AQ53FP2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.47■■□□□ 1.03
TMEM35AQ53FP2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.46■■□□□ 1.03
TMEM35AQ53FP2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM35AQ53FP2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM35AQ53FP2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.46■■□□□ 1.03
TMEM35AQ53FP2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM35AQ53FP2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM35AQ53FP2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM35AQ53FP2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM35AQ53FP2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM35AQ53FP2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
TMEM35AQ53FP2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM35AQ53FP2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM35AQ53FP2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
TMEM35AQ53FP2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.45■■□□□ 1.02
TMEM35AQ53FP2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM35AQ53FP2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
TMEM35AQ53FP2 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.45■■□□□ 1.02
TMEM35AQ53FP2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TMEM35AQ53FP2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
TMEM35AQ53FP2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.45■■□□□ 1.02
TMEM35AQ53FP2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.44■■□□□ 1.02
TMEM35AQ53FP2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM35AQ53FP2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM35AQ53FP2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM35AQ53FP2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM35AQ53FP2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.44■■□□□ 1.02
TMEM35AQ53FP2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.44■■□□□ 1.02
TMEM35AQ53FP2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.44■■□□□ 1.02
TMEM35AQ53FP2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TMEM35AQ53FP2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
TMEM35AQ53FP2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM35AQ53FP2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM35AQ53FP2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM35AQ53FP2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM35AQ53FP2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.43■■□□□ 1.02
TMEM35AQ53FP2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.43■■□□□ 1.02
TMEM35AQ53FP2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.43■■□□□ 1.02
TMEM35AQ53FP2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM35AQ53FP2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.43■■□□□ 1.02
TMEM35AQ53FP2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM35AQ53FP2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM35AQ53FP2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM35AQ53FP2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM35AQ53FP2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TMEM35AQ53FP2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM35AQ53FP2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM35AQ53FP2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
TMEM35AQ53FP2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM35AQ53FP2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM35AQ53FP2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM35AQ53FP2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.42■■□□□ 1.02
TMEM35AQ53FP2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
TMEM35AQ53FP2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.42■■□□□ 1.02
TMEM35AQ53FP2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.42■■□□□ 1.02
TMEM35AQ53FP2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
TMEM35AQ53FP2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TMEM35AQ53FP2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TMEM35AQ53FP2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.41■■□□□ 1.02
TMEM35AQ53FP2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM35AQ53FP2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM35AQ53FP2 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.41■■□□□ 1.02
TMEM35AQ53FP2 AC079630.1-202ENST00000618127 1840 ntBASIC21.41■■□□□ 1.02
TMEM35AQ53FP2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.41■■□□□ 1.02
TMEM35AQ53FP2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM35AQ53FP2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM35AQ53FP2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM35AQ53FP2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM35AQ53FP2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms