Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.19■■□□□ 1.78
CCDC144BQ3MJ40 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CCDC144BQ3MJ40 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CCDC144BQ3MJ40 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC144BQ3MJ40 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC144BQ3MJ40 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC144BQ3MJ40 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC144BQ3MJ40 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC144BQ3MJ40 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC26.18■■□□□ 1.78
CCDC144BQ3MJ40 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.18■■□□□ 1.78
CCDC144BQ3MJ40 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC26.18■■□□□ 1.78
CCDC144BQ3MJ40 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC144BQ3MJ40 GATM-206ENST00000558336 1522 ntTSL 2 BASIC26.18■■□□□ 1.78
CCDC144BQ3MJ40 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CCDC144BQ3MJ40 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.17■■□□□ 1.78
CCDC144BQ3MJ40 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC26.17■■□□□ 1.78
CCDC144BQ3MJ40 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC26.17■■□□□ 1.78
CCDC144BQ3MJ40 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CCDC144BQ3MJ40 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CCDC144BQ3MJ40 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CCDC144BQ3MJ40 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC26.17■■□□□ 1.78
CCDC144BQ3MJ40 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
CCDC144BQ3MJ40 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC144BQ3MJ40 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC144BQ3MJ40 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC26.16■■□□□ 1.78
CCDC144BQ3MJ40 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
CCDC144BQ3MJ40 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.16■■□□□ 1.78
CCDC144BQ3MJ40 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC144BQ3MJ40 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC144BQ3MJ40 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.16■■□□□ 1.78
CCDC144BQ3MJ40 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC144BQ3MJ40 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC144BQ3MJ40 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC26.16■■□□□ 1.78
CCDC144BQ3MJ40 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC144BQ3MJ40 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC26.16■■□□□ 1.78
CCDC144BQ3MJ40 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC144BQ3MJ40 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC144BQ3MJ40 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC144BQ3MJ40 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC144BQ3MJ40 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC144BQ3MJ40 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CCDC144BQ3MJ40 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
CCDC144BQ3MJ40 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CCDC144BQ3MJ40 EDA-201ENST00000338901 1233 ntBASIC26.14■■□□□ 1.78
CCDC144BQ3MJ40 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
CCDC144BQ3MJ40 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CCDC144BQ3MJ40 RARRES2P6-201ENST00000567333 442 ntBASIC26.14■■□□□ 1.78
CCDC144BQ3MJ40 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
CCDC144BQ3MJ40 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CCDC144BQ3MJ40 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CCDC144BQ3MJ40 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.14■■□□□ 1.78
CCDC144BQ3MJ40 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CCDC144BQ3MJ40 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CCDC144BQ3MJ40 AC005703.6-201ENST00000623265 1329 ntBASIC26.14■■□□□ 1.77
CCDC144BQ3MJ40 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCDC144BQ3MJ40 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.13■■□□□ 1.77
CCDC144BQ3MJ40 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.13■■□□□ 1.77
CCDC144BQ3MJ40 AL355001.2-201ENST00000620617 1191 ntBASIC26.13■■□□□ 1.77
CCDC144BQ3MJ40 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
CCDC144BQ3MJ40 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
CCDC144BQ3MJ40 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.13■■□□□ 1.77
CCDC144BQ3MJ40 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CCDC144BQ3MJ40 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CCDC144BQ3MJ40 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
CCDC144BQ3MJ40 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.12■■□□□ 1.77
CCDC144BQ3MJ40 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.12■■□□□ 1.77
CCDC144BQ3MJ40 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CCDC144BQ3MJ40 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CCDC144BQ3MJ40 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CCDC144BQ3MJ40 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CCDC144BQ3MJ40 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CCDC144BQ3MJ40 ME2-208ENST00000638937 2471 ntTSL 5 BASIC26.1■■□□□ 1.77
CCDC144BQ3MJ40 AC004812.2-201ENST00000611079 2094 ntBASIC26.1■■□□□ 1.77
CCDC144BQ3MJ40 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
CCDC144BQ3MJ40 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CCDC144BQ3MJ40 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.1■■□□□ 1.77
CCDC144BQ3MJ40 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CCDC144BQ3MJ40 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
CCDC144BQ3MJ40 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
CCDC144BQ3MJ40 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
CCDC144BQ3MJ40 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.09■■□□□ 1.77
CCDC144BQ3MJ40 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.09■■□□□ 1.77
CCDC144BQ3MJ40 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
CCDC144BQ3MJ40 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.09■■□□□ 1.77
CCDC144BQ3MJ40 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CCDC144BQ3MJ40 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CCDC144BQ3MJ40 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.08■■□□□ 1.77
CCDC144BQ3MJ40 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CCDC144BQ3MJ40 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC26.08■■□□□ 1.77
CCDC144BQ3MJ40 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC26.08■■□□□ 1.77
CCDC144BQ3MJ40 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CCDC144BQ3MJ40 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CCDC144BQ3MJ40 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
CCDC144BQ3MJ40 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC26.08■■□□□ 1.76
CCDC144BQ3MJ40 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
CCDC144BQ3MJ40 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
CCDC144BQ3MJ40 DUSP8P5-201ENST00000422884 1815 ntBASIC26.07■■□□□ 1.76
CCDC144BQ3MJ40 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CCDC144BQ3MJ40 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CCDC144BQ3MJ40 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms