Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.3■□□□□ 0.68
EFNB3Q15768 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EFNB3Q15768 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.3■□□□□ 0.68
EFNB3Q15768 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.3■□□□□ 0.68
EFNB3Q15768 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
EFNB3Q15768 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
EFNB3Q15768 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.29■□□□□ 0.68
EFNB3Q15768 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
EFNB3Q15768 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EFNB3Q15768 SERBP1P1-201ENST00000396021 1160 ntBASIC19.29■□□□□ 0.68
EFNB3Q15768 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.29■□□□□ 0.68
EFNB3Q15768 AC011298.3-201ENST00000615796 283 ntBASIC19.29■□□□□ 0.68
EFNB3Q15768 AL355001.2-201ENST00000620617 1191 ntBASIC19.29■□□□□ 0.68
EFNB3Q15768 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EFNB3Q15768 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
EFNB3Q15768 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EFNB3Q15768 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
EFNB3Q15768 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.29■□□□□ 0.68
EFNB3Q15768 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
EFNB3Q15768 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EFNB3Q15768 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EFNB3Q15768 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.28■□□□□ 0.68
EFNB3Q15768 AL031432.3-201ENST00000607698 485 ntBASIC19.28■□□□□ 0.68
EFNB3Q15768 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.28■□□□□ 0.68
EFNB3Q15768 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EFNB3Q15768 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EFNB3Q15768 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.28■□□□□ 0.68
EFNB3Q15768 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.28■□□□□ 0.68
EFNB3Q15768 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
EFNB3Q15768 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.28■□□□□ 0.68
EFNB3Q15768 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
EFNB3Q15768 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EFNB3Q15768 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
EFNB3Q15768 SUDS3P1-201ENST00000505831 966 ntBASIC19.27■□□□□ 0.68
EFNB3Q15768 AC142381.2-201ENST00000566120 298 ntBASIC19.27■□□□□ 0.68
EFNB3Q15768 AC009086.3-201ENST00000623486 1008 ntBASIC19.27■□□□□ 0.68
EFNB3Q15768 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
EFNB3Q15768 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
EFNB3Q15768 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
EFNB3Q15768 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.26■□□□□ 0.67
EFNB3Q15768 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EFNB3Q15768 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFNB3Q15768 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
EFNB3Q15768 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFNB3Q15768 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFNB3Q15768 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFNB3Q15768 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFNB3Q15768 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFNB3Q15768 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.26■□□□□ 0.67
EFNB3Q15768 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
EFNB3Q15768 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.26■□□□□ 0.67
EFNB3Q15768 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EFNB3Q15768 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFNB3Q15768 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFNB3Q15768 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.25■□□□□ 0.67
EFNB3Q15768 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFNB3Q15768 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFNB3Q15768 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
EFNB3Q15768 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EFNB3Q15768 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EFNB3Q15768 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.25■□□□□ 0.67
EFNB3Q15768 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFNB3Q15768 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EFNB3Q15768 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFNB3Q15768 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFNB3Q15768 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFNB3Q15768 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFNB3Q15768 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.25■□□□□ 0.67
EFNB3Q15768 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFNB3Q15768 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EFNB3Q15768 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFNB3Q15768 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFNB3Q15768 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EFNB3Q15768 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFNB3Q15768 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.24■□□□□ 0.67
EFNB3Q15768 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.24■□□□□ 0.67
EFNB3Q15768 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.24■□□□□ 0.67
EFNB3Q15768 MIR4767-201ENST00000582827 78 ntBASIC19.24■□□□□ 0.67
EFNB3Q15768 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.24■□□□□ 0.67
EFNB3Q15768 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFNB3Q15768 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFNB3Q15768 LINC00543-201ENST00000567234 1845 ntBASIC19.23■□□□□ 0.67
EFNB3Q15768 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFNB3Q15768 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFNB3Q15768 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFNB3Q15768 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFNB3Q15768 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFNB3Q15768 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.23■□□□□ 0.67
EFNB3Q15768 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.23■□□□□ 0.67
EFNB3Q15768 AC136469.2-201ENST00000623944 1028 ntBASIC19.23■□□□□ 0.67
EFNB3Q15768 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.23■□□□□ 0.67
EFNB3Q15768 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
EFNB3Q15768 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EFNB3Q15768 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.23■□□□□ 0.67
EFNB3Q15768 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EFNB3Q15768 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFNB3Q15768 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.22■□□□□ 0.67
EFNB3Q15768 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
EFNB3Q15768 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFNB3Q15768 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms