Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.331e-9■■■■□ 21
SRSF1Q07955 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.081e-9■■■■□ 21
SRSF1Q07955 ING5-209ENST00000489509 920 ntTSL 214.23□□□□□ -0.131e-9■■■■□ 21
SRSF1Q07955 ING5-210ENST00000492488 822 ntTSL 214.15□□□□□ -0.141e-9■■■■□ 21
SRSF1Q07955 ING5-206ENST00000482774 2376 ntTSL 313.81□□□□□ -0.21e-9■■■■□ 21
SRSF1Q07955 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.38□□□□□ -0.431e-9■■■■□ 21
SRSF1Q07955 ING5-211ENST00000493261 543 ntTSL 212.37□□□□□ -0.431e-9■■■■□ 21
SRSF1Q07955 ING5-204ENST00000445620 662 ntTSL 36.41□□□□□ -1.381e-9■■■■□ 21
SRSF1Q07955 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.37■□□□□ 0.851e-7■■■■□ 21
SRSF1Q07955 AUH-205ENST00000478465 751 ntTSL 319.84■□□□□ 0.771e-7■■■■□ 21
SRSF1Q07955 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.541e-7■■■■□ 21
SRSF1Q07955 IST1-211ENST00000537613 894 ntTSL 211.46□□□□□ -0.577e-7■■■■□ 20.9
SRSF1Q07955 IST1-207ENST00000534994 674 ntTSL 59.8□□□□□ -0.847e-7■■■■□ 20.9
SRSF1Q07955 IST1-220ENST00000541918 908 ntTSL 57.46□□□□□ -1.227e-7■■■■□ 20.9
SRSF1Q07955 PIEZO2-201ENST00000302079 9356 ntTSL 5 BASIC8.63□□□□□ -1.037e-7■■■■□ 20.9
SRSF1Q07955 PIEZO2-210ENST00000580640 8334 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.067e-7■■■■□ 20.9
SRSF1Q07955 PIEZO2-212ENST00000582913 8465 ntTSL 58.12□□□□□ -1.117e-7■■■■□ 20.9
SRSF1Q07955 PIEZO2-214ENST00000583325 1021 ntTSL 58.03□□□□□ -1.127e-7■■■■□ 20.9
SRSF1Q07955 PIEZO2-202ENST00000383408 9718 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.197e-7■■■■□ 20.9
SRSF1Q07955 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.217e-7■■■■□ 20.9
SRSF1Q07955 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC6.76□□□□□ -1.338e-7■■■■□ 20.9
SRSF1Q07955 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.33■□□□□ 0.531e-6■■■■□ 20.9
SRSF1Q07955 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.131e-6■■■■□ 20.9
SRSF1Q07955 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.131e-6■■■■□ 20.9
SRSF1Q07955 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.391e-6■■■■□ 20.9
SRSF1Q07955 DDX42-204ENST00000577940 1427 ntTSL 57.97□□□□□ -1.133e-6■■■■□ 20.9
SRSF1Q07955 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.87□□□□□ -1.313e-6■■■■□ 20.9
SRSF1Q07955 LRRC45-205ENST00000583302 1289 ntTSL 215.74■□□□□ 0.111e-6■■■■□ 20.9
SRSF1Q07955 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.475e-8■■■■□ 20.9
SRSF1Q07955 OSBPL3-204ENST00000409069 2614 ntTSL 1 (best) BASIC9.33□□□□□ -0.925e-8■■■■□ 20.9
SRSF1Q07955 OSBPL3-207ENST00000409759 3219 ntTSL 59.21□□□□□ -0.935e-8■■■■□ 20.9
SRSF1Q07955 OSBPL3-208ENST00000409863 3490 ntTSL 1 (best)9.08□□□□□ -0.965e-8■■■■□ 20.9
SRSF1Q07955 OSBPL3-202ENST00000396429 2707 ntTSL 1 (best) BASIC7.12□□□□□ -1.275e-8■■■■□ 20.9
SRSF1Q07955 OSBPL3-203ENST00000396431 2969 ntTSL 1 (best) BASIC6.78□□□□□ -1.325e-8■■■■□ 20.9
SRSF1Q07955 OSBPL3-206ENST00000409555 3088 ntTSL 56.63□□□□□ -1.355e-8■■■■□ 20.9
SRSF1Q07955 OSBPL3-205ENST00000409452 3344 ntTSL 1 (best)6.58□□□□□ -1.365e-8■■■■□ 20.9
SRSF1Q07955 MCM3-203ENST00000421471 1030 ntTSL 59.53□□□□□ -0.882e-9■■■■□ 20.9
SRSF1Q07955 PICALM-215ENST00000531558 565 ntTSL 523.7■■□□□ 1.382e-6■■■■□ 20.8
SRSF1Q07955 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC23.67■■□□□ 1.382e-6■■■■□ 20.8
SRSF1Q07955 PICALM-218ENST00000532041 699 ntTSL 322.38■■□□□ 1.172e-6■■■■□ 20.8
SRSF1Q07955 LINC-PINT-202ENST00000423414 616 ntTSL 421.4■■□□□ 1.022e-6■■■■□ 20.8
SRSF1Q07955 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.012e-6■■■■□ 20.8
SRSF1Q07955 LINC-PINT-204ENST00000431189 803 ntTSL 321.27■■□□□ 12e-6■■■■□ 20.8
SRSF1Q07955 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.48■□□□□ 0.872e-6■■■■□ 20.8
SRSF1Q07955 HSF4-214ENST00000521314 1555 ntTSL 520.11■□□□□ 0.812e-6■■■■□ 20.8
SRSF1Q07955 HSF4-203ENST00000517685 1249 ntTSL 519.9■□□□□ 0.782e-6■■■■□ 20.8
SRSF1Q07955 LINC-PINT-203ENST00000429901 565 ntTSL 419.8■□□□□ 0.762e-6■■■■□ 20.8
SRSF1Q07955 HSF4-220ENST00000522295 1539 ntTSL 519.51■□□□□ 0.712e-6■■■■□ 20.8
SRSF1Q07955 HSF4-201ENST00000434833 1568 ntTSL 1 (best)19.31■□□□□ 0.682e-6■■■■□ 20.8
SRSF1Q07955 HSF4-224ENST00000523562 1839 ntTSL 218.88■□□□□ 0.612e-6■■■■□ 20.8
SRSF1Q07955 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.62e-6■■■■□ 20.8
SRSF1Q07955 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.72■□□□□ 0.592e-6■■■■□ 20.8
SRSF1Q07955 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.582e-6■■■■□ 20.8
SRSF1Q07955 HSF4-216ENST00000521624 1358 ntTSL 1 (best)18.53■□□□□ 0.562e-6■■■■□ 20.8
SRSF1Q07955 MAPK8IP3-204ENST00000561949 489 ntTSL 217.82■□□□□ 0.442e-6■■■■□ 20.8
SRSF1Q07955 PPP6R2-207ENST00000470046 1211 ntTSL 217.42■□□□□ 0.382e-6■■■■□ 20.8
SRSF1Q07955 HSF4-213ENST00000520833 1065 ntTSL 316.26■□□□□ 0.192e-6■■■■□ 20.8
SRSF1Q07955 LYPLAL1-203ENST00000460522 1703 ntTSL 215.46■□□□□ 0.062e-6■■■■□ 20.8
SRSF1Q07955 MAPK8IP3-210ENST00000566589 873 ntTSL 515.33■□□□□ 0.042e-6■■■■□ 20.8
SRSF1Q07955 LYPLAL1-208ENST00000477938 1715 ntTSL 215.23■□□□□ 0.032e-6■■■■□ 20.8
SRSF1Q07955 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.43□□□□□ -0.12e-6■■■■□ 20.8
SRSF1Q07955 PICALM-210ENST00000528411 586 ntTSL 514.03□□□□□ -0.162e-6■■■■□ 20.8
SRSF1Q07955 HSF4-209ENST00000519601 669 ntTSL 314.01□□□□□ -0.172e-6■■■■□ 20.8
SRSF1Q07955 HSF4-217ENST00000521916 404 ntTSL 313.63□□□□□ -0.232e-6■■■■□ 20.8
SRSF1Q07955 HSF4-211ENST00000520304 565 ntTSL 513.43□□□□□ -0.262e-6■■■■□ 20.8
SRSF1Q07955 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.282e-6■■■■□ 20.8
SRSF1Q07955 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.382e-6■■■■□ 20.8
SRSF1Q07955 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.67□□□□□ -0.383e-12■■■■□ 20.8
SRSF1Q07955 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.67□□□□□ -0.383e-12■■■■□ 20.8
SRSF1Q07955 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.67□□□□□ -0.383e-12■■■■□ 20.8
SRSF1Q07955 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.383e-12■■■■□ 20.8
SRSF1Q07955 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC12.67□□□□□ -0.382e-6■■■■□ 20.8
SRSF1Q07955 HSF4-212ENST00000520528 717 ntTSL 312.37□□□□□ -0.432e-6■■■■□ 20.8
SRSF1Q07955 LYPLAL1-211ENST00000483635 2169 ntTSL 311.86□□□□□ -0.512e-6■■■■□ 20.8
SRSF1Q07955 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.512e-6■■■■□ 20.8
SRSF1Q07955 AGAP1-214ENST00000635100 2478 ntTSL 511.65□□□□□ -0.542e-6■■■■□ 20.8
SRSF1Q07955 SAT1-209ENST00000489394 1135 ntTSL 210.68□□□□□ -0.73e-12■■■■□ 20.8
SRSF1Q07955 LINC-PINT-208ENST00000451786 3505 ntTSL 2 BASIC9.91□□□□□ -0.822e-6■■■■□ 20.8
SRSF1Q07955 HMGCR-207ENST00000509085 637 ntTSL 1 (best)8.82□□□□□ -12e-6■■■■□ 20.8
SRSF1Q07955 HMGCR-210ENST00000511986 487 ntTSL 58.55□□□□□ -1.042e-6■■■■□ 20.8
SRSF1Q07955 LYPLAL1-204ENST00000463964 1874 ntTSL 37.84□□□□□ -1.152e-6■■■■□ 20.8
SRSF1Q07955 HMGCR-201ENST00000287936 4585 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.162e-6■■■■□ 20.8
SRSF1Q07955 LYPLAL1-206ENST00000474379 1662 ntTSL 1 (best)7.5□□□□□ -1.212e-6■■■■□ 20.8
SRSF1Q07955 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.212e-6■■■■□ 20.8
SRSF1Q07955 C1orf132-204ENST00000637970 1170 ntTSL 5 BASIC7.4□□□□□ -1.222e-6■■■■□ 20.8
SRSF1Q07955 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC7.3□□□□□ -1.242e-6■■■■□ 20.8
SRSF1Q07955 HMGCR-211ENST00000512053 465 ntTSL 27.29□□□□□ -1.242e-6■■■■□ 20.8
SRSF1Q07955 PICALM-203ENST00000525162 548 ntTSL 47.08□□□□□ -1.282e-6■■■■□ 20.8
SRSF1Q07955 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC6.91□□□□□ -1.32e-6■■■■□ 20.8
SRSF1Q07955 PICALM-223ENST00000534412 811 ntTSL 56.26□□□□□ -1.412e-6■■■■□ 20.8
SRSF1Q07955 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.412e-6■■■■□ 20.8
SRSF1Q07955 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.12□□□□□ -1.432e-6■■■■□ 20.8
SRSF1Q07955 GPBP1-207ENST00000513732 463 ntTSL 36.08□□□□□ -1.442e-6■■■■□ 20.8
SRSF1Q07955 PICALM-217ENST00000531930 703 ntTSL 56.01□□□□□ -1.452e-6■■■■□ 20.8
SRSF1Q07955 PICALM-208ENST00000528256 563 ntTSL 45.62□□□□□ -1.512e-6■■■■□ 20.8
SRSF1Q07955 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.532e-6■■■■□ 20.8
SRSF1Q07955 LYPLAL1-210ENST00000481007 642 ntTSL 24.52□□□□□ -1.692e-6■■■■□ 20.8
SRSF1Q07955 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.772e-6■■■■□ 20.8
SRSF1Q07955 LYPLAL1-207ENST00000475724 1715 ntTSL 33.78□□□□□ -1.82e-6■■■■□ 20.8
SRSF1Q07955 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.6□□□□□ -1.832e-6■■■■□ 20.8
Retrieved 100 of 14,836 protein–RNA pairs in 112.5 ms