Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 MKK2YPL140C 1521 nt6.12□□□□□ -1.43
UBP3Q01477 YBR056C-BYBR056C-B 159 nt6.12□□□□□ -1.43
UBP3Q01477 LOA1YPR139C 903 nt6.12□□□□□ -1.43 RIP-Chip
UBP3Q01477 YBR196C-BYBR196C-B 105 nt6.12□□□□□ -1.43
UBP3Q01477 SAD1YFR005C 1347 nt6.11□□□□□ -1.43
UBP3Q01477 AIM6YDL237W 1173 nt6.11□□□□□ -1.43
UBP3Q01477 CBS2YDR197W 1170 nt6.11□□□□□ -1.43
UBP3Q01477 YRA1YDR381W 681 nt6.11□□□□□ -1.43 RIP-Chip
UBP3Q01477 YER010CYER010C 705 nt6.11□□□□□ -1.43
UBP3Q01477 DID4YKL002W 699 nt6.11□□□□□ -1.43
UBP3Q01477 END3YNL084C 1050 nt6.11□□□□□ -1.43
UBP3Q01477 NHP6BYBR089C-A 300 nt6.11□□□□□ -1.43
UBP3Q01477 OXP1YKL215C 3861 nt6.1□□□□□ -1.43
UBP3Q01477 ECM18YDR125C 1362 nt6.1□□□□□ -1.43
UBP3Q01477 YCR047W-AYCR047W-A 207 nt6.1□□□□□ -1.43
UBP3Q01477 YDL119CYDL119C 924 nt6.1□□□□□ -1.43
UBP3Q01477 ALB1YJL122W 528 nt6.1□□□□□ -1.43 RIP-Chip
UBP3Q01477 GMH1YKR030W 822 nt6.1□□□□□ -1.43
UBP3Q01477 TVP38YKR088C 1014 nt6.1□□□□□ -1.43 RIP-Chip
UBP3Q01477 TPP1YMR156C 717 nt6.1□□□□□ -1.43
UBP3Q01477 YNL171CYNL171C 369 nt6.1□□□□□ -1.43
UBP3Q01477 ENV9YOR246C 993 nt6.1□□□□□ -1.43
UBP3Q01477 SET6YPL165C 1122 nt6.1□□□□□ -1.43
UBP3Q01477 ALG9YNL219C 1668 nt6.1□□□□□ -1.43
UBP3Q01477 PBI1YPL272C 1554 nt6.1□□□□□ -1.43
UBP3Q01477 QDR3YBR043C 2070 nt6.1□□□□□ -1.43
UBP3Q01477 PTK2YJR059W 2457 nt6.09□□□□□ -1.43
UBP3Q01477 ERG4YGL012W 1422 nt6.09□□□□□ -1.43
UBP3Q01477 AMA1YGR225W 1782 nt6.09□□□□□ -1.43
UBP3Q01477 SSK22YCR073C 3996 nt6.09□□□□□ -1.43
UBP3Q01477 YCL065WYCL065W 369 nt6.09□□□□□ -1.43
UBP3Q01477 PTC1YDL006W 846 nt6.09□□□□□ -1.43
UBP3Q01477 RPB7YDR404C 516 nt6.09□□□□□ -1.43
UBP3Q01477 SPS4YOR313C 1017 nt6.09□□□□□ -1.43
UBP3Q01477 GRX5YPL059W 453 nt6.09□□□□□ -1.43
UBP3Q01477 YPR027CYPR027C 834 nt6.09□□□□□ -1.43
UBP3Q01477 PRD1YCL057W 2139 nt6.09□□□□□ -1.43
UBP3Q01477 MCM4YPR019W 2802 nt6.09□□□□□ -1.43
UBP3Q01477 ATP1YBL099W 1638 nt6.08□□□□□ -1.44
UBP3Q01477 YDL057WYDL057W 987 nt6.08□□□□□ -1.44
UBP3Q01477 MDH3YDL078C 1032 nt6.08□□□□□ -1.44
UBP3Q01477 YLR049CYLR049C 1287 nt6.08□□□□□ -1.44
UBP3Q01477 YLR296WYLR296W 327 nt6.08□□□□□ -1.44
UBP3Q01477 YBL062WYBL062W 381 nt6.08□□□□□ -1.44
UBP3Q01477 PDR16YNL231C 1056 nt6.08□□□□□ -1.44 RIP-Chip
UBP3Q01477 MLC2YPR188C 492 nt6.08□□□□□ -1.44
UBP3Q01477 YDR042CYDR042C 603 nt6.07□□□□□ -1.44
UBP3Q01477 ROX3YBL093C 663 nt6.07□□□□□ -1.44 RIP-Chip
UBP3Q01477 MDM12YOL009C 816 nt6.07□□□□□ -1.44
UBP3Q01477 SFG1YOR315W 1041 nt6.07□□□□□ -1.44
UBP3Q01477 YOR342CYOR342C 960 nt6.07□□□□□ -1.44
UBP3Q01477 POC4YPL144W 447 nt6.07□□□□□ -1.44
UBP3Q01477 RBD2YPL246C 789 nt6.07□□□□□ -1.44 RIP-Chip
UBP3Q01477 SFB3YHR098C 2790 nt6.07□□□□□ -1.44
UBP3Q01477 SMF2YHR050W 1650 nt6.07□□□□□ -1.44 RIP-Chip
UBP3Q01477 DPH2YKL191W 1605 nt6.07□□□□□ -1.44
UBP3Q01477 CST6YIL036W 1764 nt6.06□□□□□ -1.44 RIP-Chip
UBP3Q01477 RNR3YIL066C 2610 nt6.06□□□□□ -1.44
UBP3Q01477 ALD6YPL061W 1503 nt6.06□□□□□ -1.44
UBP3Q01477 YRF1-4YLR466W 4149 nt6.06□□□□□ -1.44
UBP3Q01477 PDX3YBR035C 687 nt6.06□□□□□ -1.44
UBP3Q01477 TGS1YPL157W 948 nt6.06□□□□□ -1.44 RIP-Chip
UBP3Q01477 YPR177CYPR177C 372 nt6.06□□□□□ -1.44
UBP3Q01477 snR19snR19 568 nt6.06□□□□□ -1.44
UBP3Q01477 CLB2YPR119W 1476 nt6.06□□□□□ -1.44
UBP3Q01477 SHM1YBR263W 1473 nt6.06□□□□□ -1.44 RIP-Chip
UBP3Q01477 KEX2YNL238W 2445 nt6.05□□□□□ -1.44
UBP3Q01477 YDL144CYDL144C 1071 nt6.05□□□□□ -1.44
UBP3Q01477 YFH7YFR007W 1062 nt6.05□□□□□ -1.44
UBP3Q01477 YGL177WYGL177W 348 nt6.05□□□□□ -1.44
UBP3Q01477 CUP1-1YHR053C 186 nt6.05□□□□□ -1.44 RIP-Chip
UBP3Q01477 CUP1-2YHR055C 186 nt6.05□□□□□ -1.44
UBP3Q01477 LNP1YHR192W 837 nt6.05□□□□□ -1.44
UBP3Q01477 EGD2YHR193C 525 nt6.05□□□□□ -1.44
UBP3Q01477 PAN6YIL145C 930 nt6.05□□□□□ -1.44
UBP3Q01477 RPB4YJL140W 666 nt6.05□□□□□ -1.44
UBP3Q01477 SSP120YLR250W 705 nt6.05□□□□□ -1.44
UBP3Q01477 ARG4YHR018C 1392 nt6.05□□□□□ -1.44
UBP3Q01477 ROG3YFR022W 2202 nt6.05□□□□□ -1.44
UBP3Q01477 CDC19YAL038W 1503 nt6.04□□□□□ -1.44
UBP3Q01477 PRP19YLL036C 1512 nt6.04□□□□□ -1.44
UBP3Q01477 GGA1YDR358W 1674 nt6.04□□□□□ -1.44 RIP-Chip
UBP3Q01477 SRO9YCL037C 1305 nt6.04□□□□□ -1.44
UBP3Q01477 MEK1YOR351C 1494 nt6.04□□□□□ -1.44
UBP3Q01477 MOT2YER068W 1764 nt6.04□□□□□ -1.44 RIP-Chip
UBP3Q01477 HXT5YHR096C 1779 nt6.04□□□□□ -1.44
UBP3Q01477 YMR1YJR110W 2067 nt6.04□□□□□ -1.44 RIP-Chip
UBP3Q01477 GPM2YDL021W 936 nt6.04□□□□□ -1.44
UBP3Q01477 PAD1YDR538W 729 nt6.04□□□□□ -1.44
UBP3Q01477 YGR122WYGR122W 1209 nt6.04□□□□□ -1.44
UBP3Q01477 COS3YML132W 1140 nt6.04□□□□□ -1.44 RIP-Chip
UBP3Q01477 YOR024WYOR024W 324 nt6.04□□□□□ -1.44
UBP3Q01477 RRP36YOR287C 903 nt6.04□□□□□ -1.44
UBP3Q01477 YBR219CYBR219C 384 nt6.04□□□□□ -1.44
UBP3Q01477 COS2YBR302C 1140 nt6.04□□□□□ -1.44
UBP3Q01477 RGP1YDR137W 1992 nt6.04□□□□□ -1.44
UBP3Q01477 SLS1YLR139C 1932 nt6.03□□□□□ -1.44
UBP3Q01477 GAS5YOL030W 1455 nt6.03□□□□□ -1.44
UBP3Q01477 HEM3YDL205C 984 nt6.03□□□□□ -1.44
UBP3Q01477 YDR154CYDR154C 351 nt6.03□□□□□ -1.44
Retrieved 100 of 7,029 protein–RNA pairs in 11.4 ms