Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRPXP78539 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SRPXP78539 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRPXP78539 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.6■□□□□ 0.57
SRPXP78539 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRPXP78539 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SRPXP78539 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SRPXP78539 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SRPXP78539 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SRPXP78539 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SRPXP78539 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SRPXP78539 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SRPXP78539 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SRPXP78539 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SRPXP78539 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SRPXP78539 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
SRPXP78539 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SRPXP78539 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SRPXP78539 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SRPXP78539 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SRPXP78539 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SRPXP78539 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SRPXP78539 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SRPXP78539 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SRPXP78539 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SRPXP78539 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SRPXP78539 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SRPXP78539 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SRPXP78539 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SRPXP78539 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.58■□□□□ 0.56
SRPXP78539 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SRPXP78539 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SRPXP78539 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SRPXP78539 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SRPXP78539 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRPXP78539 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRPXP78539 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRPXP78539 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.57■□□□□ 0.56
SRPXP78539 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRPXP78539 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.57■□□□□ 0.56
SRPXP78539 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SRPXP78539 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.57■□□□□ 0.56
SRPXP78539 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRPXP78539 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SRPXP78539 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRPXP78539 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SRPXP78539 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRPXP78539 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRPXP78539 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRPXP78539 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRPXP78539 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.56■□□□□ 0.56
SRPXP78539 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.56■□□□□ 0.56
SRPXP78539 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRPXP78539 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRPXP78539 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SRPXP78539 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRPXP78539 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.56■□□□□ 0.56
SRPXP78539 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SRPXP78539 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRPXP78539 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRPXP78539 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SRPXP78539 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRPXP78539 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRPXP78539 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.55■□□□□ 0.56
SRPXP78539 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRPXP78539 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.55■□□□□ 0.56
SRPXP78539 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRPXP78539 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRPXP78539 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SRPXP78539 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SRPXP78539 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRPXP78539 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SRPXP78539 AL592295.1-201ENST00000400984 884 ntBASIC18.55■□□□□ 0.56
SRPXP78539 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.55■□□□□ 0.56
SRPXP78539 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.55■□□□□ 0.56
SRPXP78539 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SRPXP78539 AC022413.1-201ENST00000624602 984 ntBASIC18.55■□□□□ 0.56
SRPXP78539 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRPXP78539 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRPXP78539 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.55■□□□□ 0.56
SRPXP78539 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRPXP78539 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRPXP78539 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRPXP78539 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRPXP78539 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
SRPXP78539 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.55■□□□□ 0.56
SRPXP78539 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.54■□□□□ 0.56
SRPXP78539 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRPXP78539 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SRPXP78539 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.54■□□□□ 0.56
SRPXP78539 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRPXP78539 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SRPXP78539 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.54■□□□□ 0.56
SRPXP78539 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRPXP78539 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.54■□□□□ 0.56
SRPXP78539 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRPXP78539 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SRPXP78539 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRPXP78539 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRPXP78539 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms