Protein–RNA interactions for Protein: P63173

RPL38, 60S ribosomal protein L38, humanhuman

Known RBP Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38P63173 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.71■■□□□ 1.07
RPL38P63173 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.71■■□□□ 1.07
RPL38P63173 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPL38P63173 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
RPL38P63173 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPL38P63173 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPL38P63173 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPL38P63173 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
RPL38P63173 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.7■■□□□ 1.06
RPL38P63173 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.7■■□□□ 1.06
RPL38P63173 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.7■■□□□ 1.06
RPL38P63173 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
RPL38P63173 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPL38P63173 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RPL38P63173 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPL38P63173 AC233723.2-201ENST00000623798 2106 ntBASIC21.7■■□□□ 1.06
RPL38P63173 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPL38P63173 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPL38P63173 C1orf229-201ENST00000623686 2258 ntBASIC21.69■■□□□ 1.06
RPL38P63173 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPL38P63173 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPL38P63173 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
RPL38P63173 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.69■■□□□ 1.06
RPL38P63173 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RPL38P63173 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RPL38P63173 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.69■■□□□ 1.06
RPL38P63173 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPL38P63173 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.69■■□□□ 1.06
RPL38P63173 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPL38P63173 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPL38P63173 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.69■■□□□ 1.06
RPL38P63173 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.69■■□□□ 1.06
RPL38P63173 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPL38P63173 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RPL38P63173 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.69■■□□□ 1.06
RPL38P63173 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPL38P63173 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPL38P63173 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPL38P63173 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.68■■□□□ 1.06
RPL38P63173 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.68■■□□□ 1.06
RPL38P63173 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
RPL38P63173 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPL38P63173 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
RPL38P63173 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
RPL38P63173 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPL38P63173 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPL38P63173 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.67■■□□□ 1.06
RPL38P63173 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPL38P63173 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPL38P63173 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.67■■□□□ 1.06
RPL38P63173 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPL38P63173 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPL38P63173 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPL38P63173 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPL38P63173 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
RPL38P63173 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RPL38P63173 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.67■■□□□ 1.06
RPL38P63173 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPL38P63173 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPL38P63173 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPL38P63173 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPL38P63173 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPL38P63173 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPL38P63173 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.66■■□□□ 1.06
RPL38P63173 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.66■■□□□ 1.06
RPL38P63173 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPL38P63173 AC012354.3-201ENST00000623734 483 ntBASIC21.66■■□□□ 1.06
RPL38P63173 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
RPL38P63173 AL117328.2-201ENST00000624617 1940 ntBASIC21.66■■□□□ 1.06
RPL38P63173 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.66■■□□□ 1.06
RPL38P63173 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.66■■□□□ 1.06
RPL38P63173 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
RPL38P63173 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RPL38P63173 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.65■■□□□ 1.06
RPL38P63173 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.65■■□□□ 1.06
RPL38P63173 AC004448.1-201ENST00000458332 883 ntBASIC21.65■■□□□ 1.06
RPL38P63173 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.65■■□□□ 1.06
RPL38P63173 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPL38P63173 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPL38P63173 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPL38P63173 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPL38P63173 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPL38P63173 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.65■■□□□ 1.06
RPL38P63173 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.64■■□□□ 1.06
RPL38P63173 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
RPL38P63173 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RPL38P63173 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.06
RPL38P63173 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.64■■□□□ 1.05
RPL38P63173 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RPL38P63173 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.64■■□□□ 1.05
RPL38P63173 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RPL38P63173 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RPL38P63173 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPL38P63173 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPL38P63173 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RPL38P63173 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.63■■□□□ 1.05
RPL38P63173 AL033527.3-201ENST00000566366 1196 ntBASIC21.63■■□□□ 1.05
RPL38P63173 MIR4508-201ENST00000584178 70 ntBASIC21.63■■□□□ 1.05
RPL38P63173 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.63■■□□□ 1.05
RPL38P63173 AC079630.1-202ENST00000618127 1840 ntBASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms