Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPS3AP61247 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21■□□□□ 0.95
RPS3AP61247 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RPS3AP61247 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPS3AP61247 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21■□□□□ 0.95
RPS3AP61247 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPS3AP61247 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPS3AP61247 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPS3AP61247 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPS3AP61247 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RPS3AP61247 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPS3AP61247 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPS3AP61247 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
RPS3AP61247 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.99■□□□□ 0.95
RPS3AP61247 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RPS3AP61247 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RPS3AP61247 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPS3AP61247 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
RPS3AP61247 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.98■□□□□ 0.95
RPS3AP61247 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPS3AP61247 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.98■□□□□ 0.95
RPS3AP61247 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
RPS3AP61247 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPS3AP61247 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPS3AP61247 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPS3AP61247 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.97■□□□□ 0.95
RPS3AP61247 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPS3AP61247 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RPS3AP61247 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RPS3AP61247 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.97■□□□□ 0.95
RPS3AP61247 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.97■□□□□ 0.95
RPS3AP61247 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPS3AP61247 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPS3AP61247 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.96■□□□□ 0.95
RPS3AP61247 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPS3AP61247 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPS3AP61247 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPS3AP61247 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RPS3AP61247 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPS3AP61247 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RPS3AP61247 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.96■□□□□ 0.95
RPS3AP61247 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RPS3AP61247 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPS3AP61247 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.96■□□□□ 0.95
RPS3AP61247 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPS3AP61247 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPS3AP61247 MIR4787-201ENST00000607364 84 ntBASIC20.96■□□□□ 0.95
RPS3AP61247 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPS3AP61247 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPS3AP61247 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPS3AP61247 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.96■□□□□ 0.95
RPS3AP61247 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPS3AP61247 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
RPS3AP61247 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.95■□□□□ 0.94
RPS3AP61247 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.95■□□□□ 0.94
RPS3AP61247 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.95■□□□□ 0.94
RPS3AP61247 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPS3AP61247 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPS3AP61247 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RPS3AP61247 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.94■□□□□ 0.94
RPS3AP61247 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
RPS3AP61247 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.94■□□□□ 0.94
RPS3AP61247 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.94■□□□□ 0.94
RPS3AP61247 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPS3AP61247 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.94■□□□□ 0.94
RPS3AP61247 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPS3AP61247 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPS3AP61247 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPS3AP61247 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
RPS3AP61247 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RPS3AP61247 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPS3AP61247 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
RPS3AP61247 EP400NL-214ENST00000641289 2402 ntBASIC20.93■□□□□ 0.94
RPS3AP61247 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPS3AP61247 GUSBP5-201ENST00000418136 578 ntBASIC20.93■□□□□ 0.94
RPS3AP61247 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RPS3AP61247 AC021242.3-201ENST00000607598 1377 ntBASIC20.93■□□□□ 0.94
RPS3AP61247 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPS3AP61247 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPS3AP61247 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.92■□□□□ 0.94
RPS3AP61247 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPS3AP61247 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPS3AP61247 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPS3AP61247 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.92■□□□□ 0.94
RPS3AP61247 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPS3AP61247 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RPS3AP61247 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPS3AP61247 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPS3AP61247 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RPS3AP61247 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RPS3AP61247 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.92■□□□□ 0.94
RPS3AP61247 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPS3AP61247 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RPS3AP61247 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.92■□□□□ 0.94
RPS3AP61247 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
RPS3AP61247 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.92■□□□□ 0.94
RPS3AP61247 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPS3AP61247 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPS3AP61247 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPS3AP61247 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms