Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC15.64■□□□□ 0.1
CKS1BP61024 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CKS1BP61024 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CKS1BP61024 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CKS1BP61024 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CKS1BP61024 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CKS1BP61024 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC15.64■□□□□ 0.09
CKS1BP61024 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC15.64■□□□□ 0.09
CKS1BP61024 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CKS1BP61024 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CKS1BP61024 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CKS1BP61024 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CKS1BP61024 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.63■□□□□ 0.09
CKS1BP61024 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CKS1BP61024 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CKS1BP61024 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CKS1BP61024 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CKS1BP61024 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CKS1BP61024 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CKS1BP61024 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CKS1BP61024 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CKS1BP61024 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CKS1BP61024 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CKS1BP61024 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CKS1BP61024 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CKS1BP61024 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CKS1BP61024 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKS1BP61024 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKS1BP61024 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC15.62■□□□□ 0.09
CKS1BP61024 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKS1BP61024 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKS1BP61024 AL158211.5-201ENST00000623583 2518 ntBASIC15.62■□□□□ 0.09
CKS1BP61024 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CKS1BP61024 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKS1BP61024 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CKS1BP61024 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKS1BP61024 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CKS1BP61024 MIR3648-2-201ENST00000581792 180 ntBASIC15.62■□□□□ 0.09
CKS1BP61024 MIR3648-1-201ENST00000615959 180 ntBASIC15.62■□□□□ 0.09
CKS1BP61024 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC15.62■□□□□ 0.09
CKS1BP61024 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.62■□□□□ 0.09
CKS1BP61024 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CKS1BP61024 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKS1BP61024 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CKS1BP61024 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKS1BP61024 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CKS1BP61024 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CKS1BP61024 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CKS1BP61024 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CKS1BP61024 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.61■□□□□ 0.09
CKS1BP61024 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CKS1BP61024 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CKS1BP61024 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CKS1BP61024 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CKS1BP61024 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CKS1BP61024 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CKS1BP61024 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC15.61■□□□□ 0.09
CKS1BP61024 METRNL-202ENST00000570778 967 ntTSL 5 BASIC15.61■□□□□ 0.09
CKS1BP61024 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CKS1BP61024 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CKS1BP61024 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CKS1BP61024 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CKS1BP61024 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.61■□□□□ 0.09
CKS1BP61024 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CKS1BP61024 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
CKS1BP61024 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC15.61■□□□□ 0.09
CKS1BP61024 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CKS1BP61024 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CKS1BP61024 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
CKS1BP61024 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CKS1BP61024 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CKS1BP61024 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CKS1BP61024 SMPD5-203ENST00000639008 1464 ntBASIC15.6■□□□□ 0.09
CKS1BP61024 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CKS1BP61024 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CKS1BP61024 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CKS1BP61024 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CKS1BP61024 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC15.6■□□□□ 0.09
CKS1BP61024 MACF1-219ENST00000484793 834 ntTSL 2 BASIC15.6■□□□□ 0.09
CKS1BP61024 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CKS1BP61024 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CKS1BP61024 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CKS1BP61024 REST-210ENST00000638187 1334 ntTSL 5 BASIC15.6■□□□□ 0.09
CKS1BP61024 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CKS1BP61024 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CKS1BP61024 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CKS1BP61024 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CKS1BP61024 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CKS1BP61024 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CKS1BP61024 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CKS1BP61024 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CKS1BP61024 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC15.59■□□□□ 0.09
CKS1BP61024 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CKS1BP61024 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.59■□□□□ 0.09
CKS1BP61024 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CKS1BP61024 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CKS1BP61024 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CKS1BP61024 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC15.59■□□□□ 0.09
CKS1BP61024 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CKS1BP61024 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms