Protein–RNA interactions for Protein: P60059

SEC61G, Protein transport protein Sec61 subunit gamma, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61GP60059 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61GP60059 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61GP60059 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC12.65□□□□□ -0.38
SEC61GP60059 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61GP60059 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC12.65□□□□□ -0.38
SEC61GP60059 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC12.65□□□□□ -0.38
SEC61GP60059 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61GP60059 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61GP60059 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC12.65□□□□□ -0.38
SEC61GP60059 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SEC61GP60059 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
SEC61GP60059 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SEC61GP60059 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC12.65□□□□□ -0.38
SEC61GP60059 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC12.65□□□□□ -0.38
SEC61GP60059 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC12.65□□□□□ -0.38
SEC61GP60059 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC12.65□□□□□ -0.38
SEC61GP60059 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
SEC61GP60059 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61GP60059 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61GP60059 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC12.64□□□□□ -0.39
SEC61GP60059 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61GP60059 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61GP60059 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61GP60059 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61GP60059 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
SEC61GP60059 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61GP60059 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SEC61GP60059 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61GP60059 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61GP60059 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61GP60059 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC12.64□□□□□ -0.39
SEC61GP60059 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
SEC61GP60059 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC12.64□□□□□ -0.39
SEC61GP60059 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61GP60059 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SEC61GP60059 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SEC61GP60059 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61GP60059 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61GP60059 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61GP60059 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61GP60059 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61GP60059 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61GP60059 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61GP60059 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61GP60059 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61GP60059 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SEC61GP60059 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61GP60059 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SEC61GP60059 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC12.63□□□□□ -0.39
SEC61GP60059 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61GP60059 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61GP60059 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SEC61GP60059 AC073130.3-201ENST00000624389 2278 ntBASIC12.63□□□□□ -0.39
SEC61GP60059 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61GP60059 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
SEC61GP60059 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61GP60059 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SEC61GP60059 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SEC61GP60059 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC12.62□□□□□ -0.39
SEC61GP60059 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61GP60059 PROC-203ENST00000409048 1586 ntTSL 5 BASIC12.62□□□□□ -0.39
SEC61GP60059 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61GP60059 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61GP60059 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61GP60059 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SEC61GP60059 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC12.62□□□□□ -0.39
SEC61GP60059 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61GP60059 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC12.62□□□□□ -0.39
SEC61GP60059 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SEC61GP60059 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SEC61GP60059 C8orf49-201ENST00000525043 1968 ntBASIC12.61□□□□□ -0.39
SEC61GP60059 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SEC61GP60059 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61GP60059 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61GP60059 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61GP60059 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61GP60059 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61GP60059 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
SEC61GP60059 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61GP60059 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61GP60059 AL139384.1-201ENST00000612143 3047 ntBASIC12.61□□□□□ -0.39
SEC61GP60059 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC12.61□□□□□ -0.39
SEC61GP60059 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61GP60059 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61GP60059 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61GP60059 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61GP60059 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61GP60059 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61GP60059 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC12.61□□□□□ -0.39
SEC61GP60059 FER1L4-210ENST00000615531 5998 ntBASIC12.61□□□□□ -0.39
SEC61GP60059 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61GP60059 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61GP60059 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61GP60059 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61GP60059 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61GP60059 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61GP60059 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61GP60059 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SEC61GP60059 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61GP60059 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms