Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CLCN2P51788 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
CLCN2P51788 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN2P51788 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN2P51788 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN2P51788 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN2P51788 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN2P51788 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN2P51788 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.76■■□□□ 1.07
CLCN2P51788 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.76■■□□□ 1.07
CLCN2P51788 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.76■■□□□ 1.07
CLCN2P51788 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.76■■□□□ 1.07
CLCN2P51788 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN2P51788 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLCN2P51788 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN2P51788 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.75■■□□□ 1.07
CLCN2P51788 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.75■■□□□ 1.07
CLCN2P51788 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN2P51788 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CLCN2P51788 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CLCN2P51788 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN2P51788 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.75■■□□□ 1.07
CLCN2P51788 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CLCN2P51788 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN2P51788 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CLCN2P51788 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN2P51788 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLCN2P51788 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.75■■□□□ 1.07
CLCN2P51788 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CLCN2P51788 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CLCN2P51788 HLA-L-211ENST00000482052 1765 ntBASIC21.74■■□□□ 1.07
CLCN2P51788 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN2P51788 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN2P51788 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN2P51788 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.74■■□□□ 1.07
CLCN2P51788 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CLCN2P51788 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN2P51788 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLCN2P51788 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.73■■□□□ 1.07
CLCN2P51788 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CLCN2P51788 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN2P51788 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
CLCN2P51788 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CLCN2P51788 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.73■■□□□ 1.07
CLCN2P51788 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN2P51788 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN2P51788 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CLCN2P51788 GUSBP5-201ENST00000418136 578 ntBASIC21.73■■□□□ 1.07
CLCN2P51788 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.73■■□□□ 1.07
CLCN2P51788 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN2P51788 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.73■■□□□ 1.07
CLCN2P51788 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CLCN2P51788 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN2P51788 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLCN2P51788 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.72■■□□□ 1.07
CLCN2P51788 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.72■■□□□ 1.07
CLCN2P51788 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.72■■□□□ 1.07
CLCN2P51788 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN2P51788 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.72■■□□□ 1.07
CLCN2P51788 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.72■■□□□ 1.07
CLCN2P51788 MIR4787-201ENST00000607364 84 ntBASIC21.72■■□□□ 1.07
CLCN2P51788 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN2P51788 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLCN2P51788 ECEL1P1-201ENST00000373592 1742 ntBASIC21.72■■□□□ 1.07
CLCN2P51788 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLCN2P51788 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLCN2P51788 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CLCN2P51788 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.71■■□□□ 1.07
CLCN2P51788 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
CLCN2P51788 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.71■■□□□ 1.07
CLCN2P51788 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLCN2P51788 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCN2P51788 AC021242.3-201ENST00000607598 1377 ntBASIC21.71■■□□□ 1.07
CLCN2P51788 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCN2P51788 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLCN2P51788 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLCN2P51788 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.7■■□□□ 1.07
CLCN2P51788 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN2P51788 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN2P51788 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN2P51788 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN2P51788 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.7■■□□□ 1.06
CLCN2P51788 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN2P51788 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.7■■□□□ 1.06
CLCN2P51788 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.7■■□□□ 1.06
CLCN2P51788 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CLCN2P51788 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLCN2P51788 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CLCN2P51788 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.7■■□□□ 1.06
CLCN2P51788 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.69■■□□□ 1.06
CLCN2P51788 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCN2P51788 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCN2P51788 DUSP8P3-201ENST00000399571 1760 ntBASIC21.69■■□□□ 1.06
CLCN2P51788 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCN2P51788 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCN2P51788 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCN2P51788 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCN2P51788 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.69■■□□□ 1.06
CLCN2P51788 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLCN2P51788 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms