Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
CPT1AP50416 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.28■■□□□ 1.64
CPT1AP50416 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
CPT1AP50416 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CPT1AP50416 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.27■■□□□ 1.64
CPT1AP50416 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CPT1AP50416 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
CPT1AP50416 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
CPT1AP50416 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC25.27■■□□□ 1.64
CPT1AP50416 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC25.27■■□□□ 1.64
CPT1AP50416 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CPT1AP50416 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.27■■□□□ 1.64
CPT1AP50416 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
CPT1AP50416 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.26■■□□□ 1.63
CPT1AP50416 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CPT1AP50416 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.26■■□□□ 1.63
CPT1AP50416 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.26■■□□□ 1.63
CPT1AP50416 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
CPT1AP50416 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CPT1AP50416 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CPT1AP50416 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
CPT1AP50416 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.26■■□□□ 1.63
CPT1AP50416 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CPT1AP50416 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CPT1AP50416 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.25■■□□□ 1.63
CPT1AP50416 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CPT1AP50416 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.25■■□□□ 1.63
CPT1AP50416 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.25■■□□□ 1.63
CPT1AP50416 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.24■■□□□ 1.63
CPT1AP50416 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC25.24■■□□□ 1.63
CPT1AP50416 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.24■■□□□ 1.63
CPT1AP50416 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CPT1AP50416 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CPT1AP50416 TSPY26P-201ENST00000476365 1326 ntBASIC25.23■■□□□ 1.63
CPT1AP50416 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC25.23■■□□□ 1.63
CPT1AP50416 SLC47A1P1-202ENST00000449666 945 ntBASIC25.23■■□□□ 1.63
CPT1AP50416 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
CPT1AP50416 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CPT1AP50416 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CPT1AP50416 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
CPT1AP50416 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CPT1AP50416 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CPT1AP50416 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CPT1AP50416 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC25.22■■□□□ 1.63
CPT1AP50416 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.22■■□□□ 1.63
CPT1AP50416 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
CPT1AP50416 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CPT1AP50416 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
CPT1AP50416 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CPT1AP50416 AP003733.4-201ENST00000623785 1697 ntBASIC25.21■■□□□ 1.63
CPT1AP50416 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CPT1AP50416 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CPT1AP50416 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC25.21■■□□□ 1.63
CPT1AP50416 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.21■■□□□ 1.63
CPT1AP50416 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CPT1AP50416 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
CPT1AP50416 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC25.2■■□□□ 1.62
CPT1AP50416 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CPT1AP50416 NME4-202ENST00000382940 766 ntTSL 3 BASIC25.2■■□□□ 1.62
CPT1AP50416 AC034268.1-201ENST00000441047 882 ntBASIC25.2■■□□□ 1.62
CPT1AP50416 YBX1P1-201ENST00000445822 960 ntBASIC25.2■■□□□ 1.62
CPT1AP50416 NME4-211ENST00000620944 1193 ntTSL 2 BASIC25.2■■□□□ 1.62
CPT1AP50416 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
CPT1AP50416 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
CPT1AP50416 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
CPT1AP50416 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
CPT1AP50416 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CPT1AP50416 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CPT1AP50416 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
CPT1AP50416 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
CPT1AP50416 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC25.19■■□□□ 1.62
CPT1AP50416 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC25.19■■□□□ 1.62
CPT1AP50416 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.19■■□□□ 1.62
CPT1AP50416 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.19■■□□□ 1.62
CPT1AP50416 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CPT1AP50416 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
CPT1AP50416 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CPT1AP50416 ASB1-202ENST00000409297 878 ntTSL 5 BASIC25.18■■□□□ 1.62
CPT1AP50416 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC25.18■■□□□ 1.62
CPT1AP50416 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC25.18■■□□□ 1.62
CPT1AP50416 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CPT1AP50416 AC022211.4-201ENST00000625094 2161 ntBASIC25.18■■□□□ 1.62
CPT1AP50416 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CPT1AP50416 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
CPT1AP50416 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CPT1AP50416 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CPT1AP50416 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC25.17■■□□□ 1.62
CPT1AP50416 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.17■■□□□ 1.62
CPT1AP50416 IGHV3-19-201ENST00000521488 291 ntBASIC25.17■■□□□ 1.62
CPT1AP50416 AL358852.1-201ENST00000623174 1268 ntBASIC25.17■■□□□ 1.62
CPT1AP50416 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CPT1AP50416 AC133637.1-201ENST00000624115 1537 ntBASIC25.17■■□□□ 1.62
CPT1AP50416 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
CPT1AP50416 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CPT1AP50416 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CPT1AP50416 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC25.16■■□□□ 1.62
CPT1AP50416 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CPT1AP50416 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC25.16■■□□□ 1.62
CPT1AP50416 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
CPT1AP50416 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms