Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CENPAP49450 AC012354.3-201ENST00000623734 483 ntBASIC20.32■□□□□ 0.84
CENPAP49450 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CENPAP49450 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
CENPAP49450 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CENPAP49450 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CENPAP49450 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CENPAP49450 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CENPAP49450 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.31■□□□□ 0.84
CENPAP49450 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.31■□□□□ 0.84
CENPAP49450 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.31■□□□□ 0.84
CENPAP49450 THA1P-201ENST00000590384 1145 ntBASIC20.31■□□□□ 0.84
CENPAP49450 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.31■□□□□ 0.84
CENPAP49450 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.31■□□□□ 0.84
CENPAP49450 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.31■□□□□ 0.84
CENPAP49450 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CENPAP49450 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CENPAP49450 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CENPAP49450 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.3■□□□□ 0.84
CENPAP49450 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CENPAP49450 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CENPAP49450 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CENPAP49450 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CENPAP49450 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CENPAP49450 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CENPAP49450 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CENPAP49450 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CENPAP49450 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CENPAP49450 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.3■□□□□ 0.84
CENPAP49450 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CENPAP49450 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.3■□□□□ 0.84
CENPAP49450 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CENPAP49450 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CENPAP49450 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CENPAP49450 PVT1_1.1-201ENST00000615125 194 ntBASIC20.3■□□□□ 0.84
CENPAP49450 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CENPAP49450 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CENPAP49450 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CENPAP49450 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CENPAP49450 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CENPAP49450 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CENPAP49450 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.29■□□□□ 0.84
CENPAP49450 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CENPAP49450 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.29■□□□□ 0.84
CENPAP49450 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.29■□□□□ 0.84
CENPAP49450 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CENPAP49450 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CENPAP49450 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.29■□□□□ 0.84
CENPAP49450 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CENPAP49450 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CENPAP49450 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CENPAP49450 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CENPAP49450 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CENPAP49450 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.28■□□□□ 0.84
CENPAP49450 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CENPAP49450 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CENPAP49450 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CENPAP49450 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CENPAP49450 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CENPAP49450 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.28■□□□□ 0.84
CENPAP49450 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CENPAP49450 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CENPAP49450 AC092068.2-201ENST00000590491 1708 ntBASIC20.27■□□□□ 0.84
CENPAP49450 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CENPAP49450 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.27■□□□□ 0.84
CENPAP49450 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.27■□□□□ 0.84
CENPAP49450 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.27■□□□□ 0.84
CENPAP49450 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CENPAP49450 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.27■□□□□ 0.84
CENPAP49450 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CENPAP49450 C9orf163-202ENST00000624034 2573 ntBASIC20.27■□□□□ 0.83
CENPAP49450 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.26■□□□□ 0.83
CENPAP49450 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
CENPAP49450 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CENPAP49450 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.26■□□□□ 0.83
CENPAP49450 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CENPAP49450 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CENPAP49450 AC131274.2-201ENST00000580697 1507 ntBASIC20.26■□□□□ 0.83
CENPAP49450 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CENPAP49450 KRT8P33-201ENST00000508125 1423 ntBASIC20.26■□□□□ 0.83
CENPAP49450 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CENPAP49450 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CENPAP49450 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.26■□□□□ 0.83
CENPAP49450 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CENPAP49450 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CENPAP49450 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CENPAP49450 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CENPAP49450 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.25■□□□□ 0.83
CENPAP49450 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CENPAP49450 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CENPAP49450 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CENPAP49450 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CENPAP49450 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CENPAP49450 ANOS2P-203ENST00000472227 1816 ntBASIC20.25■□□□□ 0.83
CENPAP49450 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.24■□□□□ 0.83
CENPAP49450 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CENPAP49450 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CENPAP49450 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CENPAP49450 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.24■□□□□ 0.83
CENPAP49450 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms