Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC40.8■■■■■ 4.12
NCAPD3P42695 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC40.8■■■■■ 4.12
NCAPD3P42695 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC40.79■■■■■ 4.12
NCAPD3P42695 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC40.79■■■■■ 4.12
NCAPD3P42695 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC40.79■■■■■ 4.12
NCAPD3P42695 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC40.79■■■■■ 4.12
NCAPD3P42695 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC40.79■■■■■ 4.12
NCAPD3P42695 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC40.79■■■■■ 4.12
NCAPD3P42695 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC40.78■■■■■ 4.12
NCAPD3P42695 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC40.78■■■■■ 4.12
NCAPD3P42695 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC40.78■■■■■ 4.12
NCAPD3P42695 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC40.78■■■■■ 4.12
NCAPD3P42695 AC010501.1-201ENST00000606270 1962 ntBASIC40.78■■■■■ 4.12
NCAPD3P42695 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC40.77■■■■■ 4.12
NCAPD3P42695 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC40.77■■■■■ 4.12
NCAPD3P42695 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC40.77■■■■■ 4.12
NCAPD3P42695 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC40.77■■■■■ 4.12
NCAPD3P42695 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC40.77■■■■■ 4.12
NCAPD3P42695 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC40.77■■■■■ 4.12
NCAPD3P42695 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC40.77■■■■■ 4.12
NCAPD3P42695 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC40.77■■■■■ 4.12
NCAPD3P42695 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC40.77■■■■■ 4.12
NCAPD3P42695 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC40.77■■■■■ 4.12
NCAPD3P42695 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC40.77■■■■■ 4.12
NCAPD3P42695 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC40.76■■■■■ 4.12
NCAPD3P42695 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC40.76■■■■■ 4.12
NCAPD3P42695 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC40.76■■■■■ 4.12
NCAPD3P42695 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC40.76■■■■■ 4.12
NCAPD3P42695 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC40.76■■■■■ 4.12
NCAPD3P42695 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC40.76■■■■■ 4.12
NCAPD3P42695 HSCB-202ENST00000398941 955 ntTSL 2 BASIC40.76■■■■■ 4.12
NCAPD3P42695 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC40.76■■■■■ 4.12
NCAPD3P42695 AC141586.4-201ENST00000624558 1573 ntBASIC40.75■■■■■ 4.11
NCAPD3P42695 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC40.75■■■■■ 4.11
NCAPD3P42695 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC40.75■■■■■ 4.11
NCAPD3P42695 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC40.75■■■■■ 4.11
NCAPD3P42695 AC026185.1-201ENST00000445748 174 ntBASIC40.75■■■■■ 4.11
NCAPD3P42695 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC40.75■■■■■ 4.11
NCAPD3P42695 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC40.75■■■■■ 4.11
NCAPD3P42695 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC40.75■■■■■ 4.11
NCAPD3P42695 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC40.74■■■■■ 4.11
NCAPD3P42695 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC40.73■■■■■ 4.11
NCAPD3P42695 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC40.73■■■■■ 4.11
NCAPD3P42695 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC40.73■■■■■ 4.11
NCAPD3P42695 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC40.73■■■■■ 4.11
NCAPD3P42695 CROCCP5-201ENST00000436658 830 ntBASIC40.73■■■■■ 4.11
NCAPD3P42695 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC40.73■■■■■ 4.11
NCAPD3P42695 TMEM191A-211ENST00000637163 1067 ntBASIC40.73■■■■■ 4.11
NCAPD3P42695 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC40.73■■■■■ 4.11
NCAPD3P42695 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC40.73■■■■■ 4.11
NCAPD3P42695 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC40.73■■■■■ 4.11
NCAPD3P42695 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC40.72■■■■■ 4.11
NCAPD3P42695 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC40.72■■■■■ 4.11
NCAPD3P42695 NT5C3AP1-201ENST00000394500 1012 ntBASIC40.72■■■■■ 4.11
NCAPD3P42695 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC40.72■■■■■ 4.11
NCAPD3P42695 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC40.72■■■■■ 4.11
NCAPD3P42695 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC40.72■■■■■ 4.11
NCAPD3P42695 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC40.71■■■■■ 4.11
NCAPD3P42695 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC40.71■■■■■ 4.11
NCAPD3P42695 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC40.71■■■■■ 4.11
NCAPD3P42695 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC40.71■■■■■ 4.11
NCAPD3P42695 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC40.71■■■■■ 4.11
NCAPD3P42695 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC40.71■■■■■ 4.11
NCAPD3P42695 LHPP-203ENST00000392757 840 ntTSL 3 BASIC40.7■■■■■ 4.11
NCAPD3P42695 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC40.7■■■■■ 4.11
NCAPD3P42695 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC40.7■■■■■ 4.11
NCAPD3P42695 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC40.7■■■■■ 4.11
NCAPD3P42695 OR2I1P-207ENST00000453522 948 ntBASIC40.7■■■■■ 4.11
NCAPD3P42695 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC40.7■■■■■ 4.11
NCAPD3P42695 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC40.7■■■■■ 4.11
NCAPD3P42695 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC40.69■■■■■ 4.1
NCAPD3P42695 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC40.69■■■■■ 4.1
NCAPD3P42695 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC40.69■■■■■ 4.1
NCAPD3P42695 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC40.69■■■■■ 4.1
NCAPD3P42695 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC40.69■■■■■ 4.1
NCAPD3P42695 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC40.69■■■■■ 4.1
NCAPD3P42695 CD37-213ENST00000598095 1598 ntTSL 2 BASIC40.68■■■■■ 4.1
NCAPD3P42695 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC40.68■■■■■ 4.1
NCAPD3P42695 MPST-204ENST00000404393 1329 ntTSL 5 BASIC40.68■■■■■ 4.1
NCAPD3P42695 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC40.68■■■■■ 4.1
NCAPD3P42695 STX7-201ENST00000367937 1090 ntTSL 5 BASIC40.68■■■■■ 4.1
NCAPD3P42695 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC40.68■■■■■ 4.1
NCAPD3P42695 AP005435.1-201ENST00000529293 1178 ntBASIC40.68■■■■■ 4.1
NCAPD3P42695 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC40.68■■■■■ 4.1
NCAPD3P42695 AC066615.1-201ENST00000640911 628 ntBASIC40.68■■■■■ 4.1
NCAPD3P42695 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC40.67■■■■■ 4.1
NCAPD3P42695 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC40.66■■■■■ 4.1
NCAPD3P42695 AL355802.2-201ENST00000402069 882 ntBASIC40.66■■■■■ 4.1
NCAPD3P42695 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC40.66■■■■■ 4.1
NCAPD3P42695 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC40.66■■■■■ 4.1
NCAPD3P42695 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC40.66■■■■■ 4.1
NCAPD3P42695 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC40.65■■■■■ 4.1
NCAPD3P42695 NCF1B-203ENST00000435988 1254 ntBASIC40.65■■■■■ 4.1
NCAPD3P42695 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC40.65■■■■■ 4.1
NCAPD3P42695 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC40.65■■■■■ 4.1
NCAPD3P42695 AC010525.1-201ENST00000585559 441 ntBASIC40.65■■■■■ 4.1
NCAPD3P42695 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC40.65■■■■■ 4.1
NCAPD3P42695 USF2-207ENST00000595068 1612 ntTSL 5 BASIC40.65■■■■■ 4.1
NCAPD3P42695 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC40.64■■■■■ 4.1
NCAPD3P42695 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC40.64■■■■■ 4.1
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms