Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SAA4P35542 AC004812.2-201ENST00000611079 2094 ntBASIC18.3■□□□□ 0.52
SAA4P35542 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SAA4P35542 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SAA4P35542 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SAA4P35542 SYT6-210ENST00000641643 1587 ntBASIC18.3■□□□□ 0.52
SAA4P35542 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.3■□□□□ 0.52
SAA4P35542 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SAA4P35542 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SAA4P35542 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SAA4P35542 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.29■□□□□ 0.52
SAA4P35542 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.29■□□□□ 0.52
SAA4P35542 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SAA4P35542 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SAA4P35542 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SAA4P35542 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SAA4P35542 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SAA4P35542 AC135279.3-201ENST00000610945 1311 ntBASIC18.28■□□□□ 0.52
SAA4P35542 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SAA4P35542 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SAA4P35542 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SAA4P35542 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SAA4P35542 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SAA4P35542 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SAA4P35542 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.28■□□□□ 0.52
SAA4P35542 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SAA4P35542 AC106739.1-201ENST00000617035 715 ntBASIC18.28■□□□□ 0.52
SAA4P35542 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SAA4P35542 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SAA4P35542 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.27■□□□□ 0.52
SAA4P35542 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SAA4P35542 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.27■□□□□ 0.52
SAA4P35542 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SAA4P35542 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.27■□□□□ 0.52
SAA4P35542 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SAA4P35542 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SAA4P35542 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.27■□□□□ 0.51
SAA4P35542 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SAA4P35542 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SAA4P35542 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SAA4P35542 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SAA4P35542 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.26■□□□□ 0.51
SAA4P35542 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SAA4P35542 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SAA4P35542 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SAA4P35542 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.26■□□□□ 0.51
SAA4P35542 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.26■□□□□ 0.51
SAA4P35542 AC024257.2-201ENST00000549699 147 ntBASIC18.26■□□□□ 0.51
SAA4P35542 AC009086.3-201ENST00000623486 1008 ntBASIC18.26■□□□□ 0.51
SAA4P35542 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.26■□□□□ 0.51
SAA4P35542 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SAA4P35542 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SAA4P35542 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.26■□□□□ 0.51
SAA4P35542 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SAA4P35542 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SAA4P35542 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
SAA4P35542 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.26■□□□□ 0.51
SAA4P35542 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SAA4P35542 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SAA4P35542 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SAA4P35542 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SAA4P35542 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SAA4P35542 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SAA4P35542 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SAA4P35542 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.25■□□□□ 0.51
SAA4P35542 AC133561.4-201ENST00000566112 224 ntBASIC18.25■□□□□ 0.51
SAA4P35542 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SAA4P35542 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SAA4P35542 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SAA4P35542 ABCB10P4-201ENST00000566803 2184 ntBASIC18.24■□□□□ 0.51
SAA4P35542 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SAA4P35542 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SAA4P35542 SERBP1P1-201ENST00000396021 1160 ntBASIC18.24■□□□□ 0.51
SAA4P35542 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.24■□□□□ 0.51
SAA4P35542 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SAA4P35542 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SAA4P35542 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SAA4P35542 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SAA4P35542 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SAA4P35542 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SAA4P35542 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SAA4P35542 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SAA4P35542 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SAA4P35542 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.23■□□□□ 0.51
SAA4P35542 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SAA4P35542 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SAA4P35542 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SAA4P35542 AC006455.2-201ENST00000429931 906 ntBASIC18.23■□□□□ 0.51
SAA4P35542 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SAA4P35542 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
SAA4P35542 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.23■□□□□ 0.51
SAA4P35542 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.23■□□□□ 0.51
SAA4P35542 AC005837.3-201ENST00000612163 286 ntBASIC18.23■□□□□ 0.51
SAA4P35542 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.23■□□□□ 0.51
SAA4P35542 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SAA4P35542 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.23■□□□□ 0.51
SAA4P35542 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.22■□□□□ 0.51
SAA4P35542 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.22■□□□□ 0.51
SAA4P35542 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.22■□□□□ 0.51
SAA4P35542 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms