Protein–RNA interactions for Protein: P19623

SRM, Spermidine synthase, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP19623 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
SRMP19623 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.71■□□□□ 0.75
SRMP19623 AC133552.2-201ENST00000619106 1032 ntBASIC19.71■□□□□ 0.75
SRMP19623 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRMP19623 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.71■□□□□ 0.75
SRMP19623 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRMP19623 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRMP19623 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRMP19623 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRMP19623 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.71■□□□□ 0.75
SRMP19623 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SRMP19623 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SRMP19623 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SRMP19623 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SRMP19623 AC009831.1-201ENST00000580420 1582 ntBASIC19.7■□□□□ 0.74
SRMP19623 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.7■□□□□ 0.74
SRMP19623 AC242852.2-201ENST00000615738 1807 ntBASIC19.7■□□□□ 0.74
SRMP19623 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.7■□□□□ 0.74
SRMP19623 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SRMP19623 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SRMP19623 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SRMP19623 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SRMP19623 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SRMP19623 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SRMP19623 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.69■□□□□ 0.74
SRMP19623 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SRMP19623 ESRRAP2-201ENST00000418437 1549 ntBASIC19.69■□□□□ 0.74
SRMP19623 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SRMP19623 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SRMP19623 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SRMP19623 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SRMP19623 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.69■□□□□ 0.74
SRMP19623 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.69■□□□□ 0.74
SRMP19623 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SRMP19623 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRMP19623 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRMP19623 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRMP19623 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.68■□□□□ 0.74
SRMP19623 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRMP19623 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SRMP19623 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SRMP19623 ALDH1A3-203ENST00000557963 1670 ntBASIC19.68■□□□□ 0.74
SRMP19623 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRMP19623 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRMP19623 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRMP19623 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SRMP19623 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
SRMP19623 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRMP19623 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRMP19623 MIR7108-201ENST00000614319 87 ntBASIC19.67■□□□□ 0.74
SRMP19623 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRMP19623 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRMP19623 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SRMP19623 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.66■□□□□ 0.74
SRMP19623 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.66■□□□□ 0.74
SRMP19623 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SRMP19623 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SRMP19623 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.66■□□□□ 0.74
SRMP19623 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.66■□□□□ 0.74
SRMP19623 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRMP19623 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRMP19623 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SRMP19623 AC018755.3-202ENST00000596210 929 ntBASIC19.66■□□□□ 0.74
SRMP19623 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRMP19623 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRMP19623 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRMP19623 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SRMP19623 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SRMP19623 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRMP19623 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRMP19623 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SRMP19623 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SRMP19623 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRMP19623 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SRMP19623 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRMP19623 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SRMP19623 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRMP19623 GPX1-201ENST00000419349 1106 ntBASIC19.64■□□□□ 0.73
SRMP19623 AC087393.1-201ENST00000582896 145 ntBASIC19.64■□□□□ 0.73
SRMP19623 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SRMP19623 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SRMP19623 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.64■□□□□ 0.73
SRMP19623 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SRMP19623 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRMP19623 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRMP19623 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRMP19623 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRMP19623 AC007375.3-201ENST00000600936 2314 ntBASIC19.63■□□□□ 0.73
SRMP19623 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRMP19623 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.63■□□□□ 0.73
SRMP19623 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRMP19623 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRMP19623 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRMP19623 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.63■□□□□ 0.73
SRMP19623 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRMP19623 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRMP19623 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRMP19623 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SRMP19623 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SRMP19623 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 196.1 ms