Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
MT-ND4P03905 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.58■□□□□ 0.72
MT-ND4P03905 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
MT-ND4P03905 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND4P03905 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND4P03905 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND4P03905 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND4P03905 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND4P03905 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND4P03905 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND4P03905 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND4P03905 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND4P03905 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND4P03905 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
MT-ND4P03905 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND4P03905 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND4P03905 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
MT-ND4P03905 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.56■□□□□ 0.72
MT-ND4P03905 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND4P03905 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND4P03905 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND4P03905 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND4P03905 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
MT-ND4P03905 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND4P03905 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND4P03905 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND4P03905 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
MT-ND4P03905 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND4P03905 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND4P03905 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.56■□□□□ 0.72
MT-ND4P03905 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MT-ND4P03905 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
MT-ND4P03905 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
MT-ND4P03905 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND4P03905 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND4P03905 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
MT-ND4P03905 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.55■□□□□ 0.72
MT-ND4P03905 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.55■□□□□ 0.72
MT-ND4P03905 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND4P03905 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND4P03905 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
MT-ND4P03905 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND4P03905 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND4P03905 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.55■□□□□ 0.72
MT-ND4P03905 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
MT-ND4P03905 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
MT-ND4P03905 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
MT-ND4P03905 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
MT-ND4P03905 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
MT-ND4P03905 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
MT-ND4P03905 AC092068.2-201ENST00000590491 1708 ntBASIC19.54■□□□□ 0.72
MT-ND4P03905 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
MT-ND4P03905 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND4P03905 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND4P03905 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
MT-ND4P03905 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND4P03905 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
MT-ND4P03905 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND4P03905 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND4P03905 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
MT-ND4P03905 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MT-ND4P03905 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
MT-ND4P03905 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
MT-ND4P03905 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.53■□□□□ 0.72
MT-ND4P03905 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND4P03905 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND4P03905 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND4P03905 AL592293.1-201ENST00000502889 1188 ntBASIC19.53■□□□□ 0.72
MT-ND4P03905 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
MT-ND4P03905 AC018755.3-202ENST00000596210 929 ntBASIC19.53■□□□□ 0.72
MT-ND4P03905 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
MT-ND4P03905 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND4P03905 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
MT-ND4P03905 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.52■□□□□ 0.72
MT-ND4P03905 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.52■□□□□ 0.72
MT-ND4P03905 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-ND4P03905 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-ND4P03905 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-ND4P03905 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.52■□□□□ 0.72
MT-ND4P03905 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-ND4P03905 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-ND4P03905 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-ND4P03905 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.52■□□□□ 0.71
MT-ND4P03905 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MT-ND4P03905 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.52■□□□□ 0.71
MT-ND4P03905 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
MT-ND4P03905 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MT-ND4P03905 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
MT-ND4P03905 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND4P03905 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.51■□□□□ 0.71
MT-ND4P03905 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
MT-ND4P03905 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.51■□□□□ 0.71
MT-ND4P03905 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.51■□□□□ 0.71
MT-ND4P03905 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND4P03905 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND4P03905 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.51■□□□□ 0.71
MT-ND4P03905 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND4P03905 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.5■□□□□ 0.71
MT-ND4P03905 RPS2P7-201ENST00000447334 885 ntBASIC19.5■□□□□ 0.71
MT-ND4P03905 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms