Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MT-ND1P03886 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MT-ND1P03886 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MT-ND1P03886 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MT-ND1P03886 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
MT-ND1P03886 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
MT-ND1P03886 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
MT-ND1P03886 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
MT-ND1P03886 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
MT-ND1P03886 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MT-ND1P03886 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MT-ND1P03886 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
MT-ND1P03886 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MT-ND1P03886 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
MT-ND1P03886 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MT-ND1P03886 AL592293.1-201ENST00000502889 1188 ntBASIC21.23■□□□□ 0.99
MT-ND1P03886 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
MT-ND1P03886 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.23■□□□□ 0.99
MT-ND1P03886 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
MT-ND1P03886 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.23■□□□□ 0.99
MT-ND1P03886 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.23■□□□□ 0.99
MT-ND1P03886 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MT-ND1P03886 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MT-ND1P03886 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MT-ND1P03886 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MT-ND1P03886 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.22■□□□□ 0.99
MT-ND1P03886 AC018755.3-202ENST00000596210 929 ntBASIC21.22■□□□□ 0.99
MT-ND1P03886 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
MT-ND1P03886 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MT-ND1P03886 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
MT-ND1P03886 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
MT-ND1P03886 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.22■□□□□ 0.99
MT-ND1P03886 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
MT-ND1P03886 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MT-ND1P03886 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
MT-ND1P03886 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.21■□□□□ 0.99
MT-ND1P03886 ECEL1P1-201ENST00000373592 1742 ntBASIC21.21■□□□□ 0.99
MT-ND1P03886 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MT-ND1P03886 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
MT-ND1P03886 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.21■□□□□ 0.99
MT-ND1P03886 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
MT-ND1P03886 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MT-ND1P03886 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
MT-ND1P03886 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.21■□□□□ 0.99
MT-ND1P03886 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
MT-ND1P03886 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.21■□□□□ 0.99
MT-ND1P03886 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MT-ND1P03886 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MT-ND1P03886 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.21■□□□□ 0.99
MT-ND1P03886 AC090877.2-201ENST00000558441 1738 ntBASIC21.21■□□□□ 0.99
MT-ND1P03886 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MT-ND1P03886 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MT-ND1P03886 RPS2P7-201ENST00000447334 885 ntBASIC21.2■□□□□ 0.98
MT-ND1P03886 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.2■□□□□ 0.98
MT-ND1P03886 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MT-ND1P03886 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MT-ND1P03886 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.2■□□□□ 0.98
MT-ND1P03886 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.2■□□□□ 0.98
MT-ND1P03886 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.2■□□□□ 0.98
MT-ND1P03886 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MT-ND1P03886 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
MT-ND1P03886 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MT-ND1P03886 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.19■□□□□ 0.98
MT-ND1P03886 RARRES2P2-201ENST00000394842 485 ntBASIC21.19■□□□□ 0.98
MT-ND1P03886 SPCS2P3-201ENST00000500401 656 ntBASIC21.19■□□□□ 0.98
MT-ND1P03886 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.19■□□□□ 0.98
MT-ND1P03886 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.19■□□□□ 0.98
MT-ND1P03886 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MT-ND1P03886 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.19■□□□□ 0.98
MT-ND1P03886 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.19■□□□□ 0.98
MT-ND1P03886 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MT-ND1P03886 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
MT-ND1P03886 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MT-ND1P03886 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MT-ND1P03886 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
MT-ND1P03886 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.18■□□□□ 0.98
MT-ND1P03886 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MT-ND1P03886 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
MT-ND1P03886 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MT-ND1P03886 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
MT-ND1P03886 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
MT-ND1P03886 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MT-ND1P03886 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
MT-ND1P03886 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MT-ND1P03886 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MT-ND1P03886 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MT-ND1P03886 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.17■□□□□ 0.98
MT-ND1P03886 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MT-ND1P03886 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MT-ND1P03886 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
MT-ND1P03886 AC127496.7-201ENST00000625110 1798 ntBASIC21.17■□□□□ 0.98
MT-ND1P03886 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MT-ND1P03886 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MT-ND1P03886 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MT-ND1P03886 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MT-ND1P03886 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.16■□□□□ 0.98
MT-ND1P03886 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
MT-ND1P03886 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MT-ND1P03886 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MT-ND1P03886 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms