Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQB1P01920 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQB1P01920 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQB1P01920 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQB1P01920 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQB1P01920 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQB1P01920 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQB1P01920 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.56■□□□□ 0.72
HLA-DQB1P01920 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQB1P01920 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQB1P01920 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
HLA-DQB1P01920 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
HLA-DQB1P01920 FBXW4P1-201ENST00000426721 2239 ntBASIC19.56■□□□□ 0.72
HLA-DQB1P01920 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQB1P01920 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-DQB1P01920 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DQB1P01920 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DQB1P01920 AC073130.3-201ENST00000624389 2278 ntBASIC19.55■□□□□ 0.72
HLA-DQB1P01920 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.55■□□□□ 0.72
HLA-DQB1P01920 SMPD5-203ENST00000639008 1464 ntBASIC19.55■□□□□ 0.72
HLA-DQB1P01920 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DQB1P01920 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HLA-DQB1P01920 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DQB1P01920 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.55■□□□□ 0.72
HLA-DQB1P01920 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DQB1P01920 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DQB1P01920 AC139530.1-201ENST00000575312 1977 ntBASIC19.55■□□□□ 0.72
HLA-DQB1P01920 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-DQB1P01920 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
HLA-DQB1P01920 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
HLA-DQB1P01920 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQB1P01920 AC092053.2-201ENST00000640557 1818 ntBASIC19.54■□□□□ 0.72
HLA-DQB1P01920 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQB1P01920 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.54■□□□□ 0.72
HLA-DQB1P01920 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQB1P01920 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
HLA-DQB1P01920 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQB1P01920 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQB1P01920 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DQB1P01920 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DQB1P01920 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.53■□□□□ 0.72
HLA-DQB1P01920 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DQB1P01920 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DQB1P01920 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.53■□□□□ 0.72
HLA-DQB1P01920 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DQB1P01920 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
HLA-DQB1P01920 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.53■□□□□ 0.72
HLA-DQB1P01920 AC060814.1-201ENST00000554326 538 ntBASIC19.53■□□□□ 0.72
HLA-DQB1P01920 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DQB1P01920 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DQB1P01920 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DQB1P01920 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.53■□□□□ 0.72
HLA-DQB1P01920 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.53■□□□□ 0.72
HLA-DQB1P01920 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.53■□□□□ 0.72
HLA-DQB1P01920 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DQB1P01920 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
HLA-DQB1P01920 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DQB1P01920 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DQB1P01920 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.52■□□□□ 0.72
HLA-DQB1P01920 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
HLA-DQB1P01920 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
HLA-DQB1P01920 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.51■□□□□ 0.71
HLA-DQB1P01920 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DQB1P01920 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DQB1P01920 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
HLA-DQB1P01920 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
HLA-DQB1P01920 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.51■□□□□ 0.71
HLA-DQB1P01920 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
HLA-DQB1P01920 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.51■□□□□ 0.71
HLA-DQB1P01920 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DQB1P01920 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
HLA-DQB1P01920 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DQB1P01920 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQB1P01920 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQB1P01920 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
HLA-DQB1P01920 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQB1P01920 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.5■□□□□ 0.71
HLA-DQB1P01920 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.5■□□□□ 0.71
HLA-DQB1P01920 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQB1P01920 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQB1P01920 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
HLA-DQB1P01920 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQB1P01920 AC026310.3-201ENST00000625186 2373 ntBASIC19.49■□□□□ 0.71
HLA-DQB1P01920 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQB1P01920 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HLA-DQB1P01920 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HLA-DQB1P01920 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQB1P01920 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQB1P01920 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
HLA-DQB1P01920 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQB1P01920 AL161729.1-201ENST00000604104 1402 ntBASIC19.49■□□□□ 0.71
HLA-DQB1P01920 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.49■□□□□ 0.71
HLA-DQB1P01920 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.49■□□□□ 0.71
HLA-DQB1P01920 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB1P01920 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB1P01920 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB1P01920 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB1P01920 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB1P01920 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQB1P01920 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms