Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
IFNA1P01562 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
IFNA1P01562 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
IFNA1P01562 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.87■□□□□ 0.45
IFNA1P01562 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
IFNA1P01562 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
IFNA1P01562 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
IFNA1P01562 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IFNA1P01562 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
IFNA1P01562 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
IFNA1P01562 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IFNA1P01562 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
IFNA1P01562 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.86■□□□□ 0.45
IFNA1P01562 AC148477.6-201ENST00000623746 465 ntBASIC17.86■□□□□ 0.45
IFNA1P01562 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.86■□□□□ 0.45
IFNA1P01562 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.86■□□□□ 0.45
IFNA1P01562 ESRRAP2-201ENST00000418437 1549 ntBASIC17.86■□□□□ 0.45
IFNA1P01562 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IFNA1P01562 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.86■□□□□ 0.45
IFNA1P01562 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IFNA1P01562 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
IFNA1P01562 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
IFNA1P01562 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IFNA1P01562 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
IFNA1P01562 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.85■□□□□ 0.45
IFNA1P01562 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IFNA1P01562 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
IFNA1P01562 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
IFNA1P01562 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
IFNA1P01562 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.85■□□□□ 0.45
IFNA1P01562 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
IFNA1P01562 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
IFNA1P01562 AL137060.1-201ENST00000618151 2648 ntBASIC17.85■□□□□ 0.45
IFNA1P01562 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IFNA1P01562 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.84■□□□□ 0.45
IFNA1P01562 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IFNA1P01562 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IFNA1P01562 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.84■□□□□ 0.45
IFNA1P01562 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
IFNA1P01562 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IFNA1P01562 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IFNA1P01562 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.84■□□□□ 0.45
IFNA1P01562 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IFNA1P01562 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
IFNA1P01562 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IFNA1P01562 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
IFNA1P01562 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.84■□□□□ 0.45
IFNA1P01562 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
IFNA1P01562 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IFNA1P01562 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.84■□□□□ 0.45
IFNA1P01562 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IFNA1P01562 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IFNA1P01562 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IFNA1P01562 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
IFNA1P01562 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
IFNA1P01562 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
IFNA1P01562 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
IFNA1P01562 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
IFNA1P01562 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
IFNA1P01562 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.83■□□□□ 0.45
IFNA1P01562 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.83■□□□□ 0.45
IFNA1P01562 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
IFNA1P01562 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
IFNA1P01562 MIR3665-201ENST00000578708 105 ntBASIC17.83■□□□□ 0.44
IFNA1P01562 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IFNA1P01562 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IFNA1P01562 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IFNA1P01562 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
IFNA1P01562 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.83■□□□□ 0.44
IFNA1P01562 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.83■□□□□ 0.44
IFNA1P01562 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFNA1P01562 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IFNA1P01562 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFNA1P01562 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.82■□□□□ 0.44
IFNA1P01562 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IFNA1P01562 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFNA1P01562 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.82■□□□□ 0.44
IFNA1P01562 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IFNA1P01562 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.82■□□□□ 0.44
IFNA1P01562 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
IFNA1P01562 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.82■□□□□ 0.44
IFNA1P01562 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IFNA1P01562 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFNA1P01562 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IFNA1P01562 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IFNA1P01562 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.81■□□□□ 0.44
IFNA1P01562 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IFNA1P01562 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
IFNA1P01562 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IFNA1P01562 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.81■□□□□ 0.44
IFNA1P01562 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IFNA1P01562 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IFNA1P01562 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IFNA1P01562 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IFNA1P01562 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
IFNA1P01562 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IFNA1P01562 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IFNA1P01562 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IFNA1P01562 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IFNA1P01562 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms