Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN1O95832 AC027612.3-201ENST00000413684 1047 ntBASIC20.13■□□□□ 0.81
CLDN1O95832 AC006455.2-201ENST00000429931 906 ntBASIC20.13■□□□□ 0.81
CLDN1O95832 AC126544.1-201ENST00000580842 1059 ntBASIC20.13■□□□□ 0.81
CLDN1O95832 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.13■□□□□ 0.81
CLDN1O95832 DUSP8P4-201ENST00000399538 1761 ntBASIC20.13■□□□□ 0.81
CLDN1O95832 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN1O95832 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CLDN1O95832 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CLDN1O95832 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN1O95832 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CLDN1O95832 ABHD17AP1-201ENST00000358206 933 ntBASIC20.12■□□□□ 0.81
CLDN1O95832 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.12■□□□□ 0.81
CLDN1O95832 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.12■□□□□ 0.81
CLDN1O95832 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN1O95832 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN1O95832 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.11■□□□□ 0.81
CLDN1O95832 TSPY26P-201ENST00000476365 1326 ntBASIC20.11■□□□□ 0.81
CLDN1O95832 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CLDN1O95832 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN1O95832 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.11■□□□□ 0.81
CLDN1O95832 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.11■□□□□ 0.81
CLDN1O95832 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.11■□□□□ 0.81
CLDN1O95832 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.11■□□□□ 0.81
CLDN1O95832 NTF6G-201ENST00000591094 616 ntBASIC20.11■□□□□ 0.81
CLDN1O95832 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.11■□□□□ 0.81
CLDN1O95832 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN1O95832 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.1■□□□□ 0.81
CLDN1O95832 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN1O95832 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CLDN1O95832 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN1O95832 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CLDN1O95832 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN1O95832 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.1■□□□□ 0.81
CLDN1O95832 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN1O95832 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN1O95832 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN1O95832 MIR3181-201ENST00000578512 73 ntBASIC20.1■□□□□ 0.81
CLDN1O95832 AC241377.3-202ENST00000626088 1088 ntBASIC20.1■□□□□ 0.81
CLDN1O95832 AC241585.3-202ENST00000628937 1088 ntBASIC20.1■□□□□ 0.81
CLDN1O95832 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN1O95832 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN1O95832 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN1O95832 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN1O95832 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN1O95832 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CLDN1O95832 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.09■□□□□ 0.81
CLDN1O95832 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN1O95832 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CLDN1O95832 C17orf82-201ENST00000623772 1530 ntBASIC20.09■□□□□ 0.81
CLDN1O95832 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CLDN1O95832 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN1O95832 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN1O95832 CCDC92B-201ENST00000575506 885 ntBASIC20.09■□□□□ 0.81
CLDN1O95832 MIR6084-201ENST00000622012 110 ntBASIC20.09■□□□□ 0.81
CLDN1O95832 AL358852.1-201ENST00000623174 1268 ntBASIC20.09■□□□□ 0.81
CLDN1O95832 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN1O95832 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN1O95832 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN1O95832 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN1O95832 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN1O95832 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN1O95832 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.09■□□□□ 0.81
CLDN1O95832 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN1O95832 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN1O95832 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN1O95832 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN1O95832 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.08■□□□□ 0.81
CLDN1O95832 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN1O95832 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.08■□□□□ 0.81
CLDN1O95832 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN1O95832 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN1O95832 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN1O95832 AC020928.2-201ENST00000588717 2197 ntBASIC20.08■□□□□ 0.8
CLDN1O95832 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN1O95832 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.07■□□□□ 0.8
CLDN1O95832 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN1O95832 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN1O95832 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN1O95832 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CLDN1O95832 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.07■□□□□ 0.8
CLDN1O95832 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.07■□□□□ 0.8
CLDN1O95832 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CLDN1O95832 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.07■□□□□ 0.8
CLDN1O95832 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.07■□□□□ 0.8
CLDN1O95832 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN1O95832 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CLDN1O95832 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN1O95832 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CLDN1O95832 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN1O95832 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN1O95832 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CLDN1O95832 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.06■□□□□ 0.8
CLDN1O95832 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN1O95832 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN1O95832 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN1O95832 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN1O95832 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CLDN1O95832 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN1O95832 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms