Protein–RNA interactions for Protein: O95714

HERC2, E3 ubiquitin-protein ligase HERC2, humanhuman

Predictions only

Length 4,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2O95714 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC14.41□□□□□ -0.1
HERC2O95714 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
HERC2O95714 AICDA-202ENST00000537228 667 ntTSL 5 BASIC14.41□□□□□ -0.1
HERC2O95714 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HERC2O95714 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.41□□□□□ -0.1
HERC2O95714 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HERC2O95714 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HERC2O95714 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HERC2O95714 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HERC2O95714 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC14.41□□□□□ -0.1
HERC2O95714 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HERC2O95714 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.4□□□□□ -0.1
HERC2O95714 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.4□□□□□ -0.1
HERC2O95714 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HERC2O95714 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.4□□□□□ -0.1
HERC2O95714 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC14.4□□□□□ -0.1
HERC2O95714 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HERC2O95714 REST-206ENST00000612429 1376 ntTSL 5 BASIC14.4□□□□□ -0.1
HERC2O95714 REST-207ENST00000616975 1370 ntTSL 5 BASIC14.4□□□□□ -0.1
HERC2O95714 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HERC2O95714 UNC93B4-201ENST00000505679 747 ntBASIC14.4□□□□□ -0.1
HERC2O95714 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
HERC2O95714 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HERC2O95714 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HERC2O95714 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14.4□□□□□ -0.1
HERC2O95714 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HERC2O95714 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HERC2O95714 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HERC2O95714 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.4□□□□□ -0.1
HERC2O95714 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC14.4□□□□□ -0.1
HERC2O95714 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
HERC2O95714 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HERC2O95714 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
HERC2O95714 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HERC2O95714 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HERC2O95714 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HERC2O95714 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.39□□□□□ -0.11
HERC2O95714 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HERC2O95714 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HERC2O95714 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.39□□□□□ -0.11
HERC2O95714 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HERC2O95714 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC14.39□□□□□ -0.11
HERC2O95714 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
HERC2O95714 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
HERC2O95714 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HERC2O95714 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HERC2O95714 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HERC2O95714 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HERC2O95714 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HERC2O95714 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.39□□□□□ -0.11
HERC2O95714 pRNA.6-201ENST00000610482 90 ntBASIC14.39□□□□□ -0.11
HERC2O95714 pRNA.5-201ENST00000612139 90 ntBASIC14.39□□□□□ -0.11
HERC2O95714 pRNA.11-201ENST00000618423 90 ntBASIC14.39□□□□□ -0.11
HERC2O95714 pRNA.13-201ENST00000619112 90 ntBASIC14.39□□□□□ -0.11
HERC2O95714 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HERC2O95714 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HERC2O95714 RARRES2P4-201ENST00000514074 484 ntBASIC14.38□□□□□ -0.11
HERC2O95714 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HERC2O95714 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HERC2O95714 SSSCA1-AS1-201ENST00000567594 614 ntBASIC14.38□□□□□ -0.11
HERC2O95714 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.38□□□□□ -0.11
HERC2O95714 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.38□□□□□ -0.11
HERC2O95714 LINC01023-201ENST00000606054 436 ntBASIC14.38□□□□□ -0.11
HERC2O95714 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HERC2O95714 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HERC2O95714 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.38□□□□□ -0.11
HERC2O95714 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
HERC2O95714 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
HERC2O95714 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
HERC2O95714 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
HERC2O95714 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.37□□□□□ -0.11
HERC2O95714 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.37□□□□□ -0.11
HERC2O95714 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HERC2O95714 RCN1P1-201ENST00000400413 996 ntBASIC14.37□□□□□ -0.11
HERC2O95714 AL158047.1-201ENST00000445918 881 ntBASIC14.37□□□□□ -0.11
HERC2O95714 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HERC2O95714 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HERC2O95714 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC14.37□□□□□ -0.11
HERC2O95714 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HERC2O95714 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HERC2O95714 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HERC2O95714 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC14.37□□□□□ -0.11
HERC2O95714 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.37□□□□□ -0.11
HERC2O95714 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HERC2O95714 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC14.37□□□□□ -0.11
HERC2O95714 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.36□□□□□ -0.11
HERC2O95714 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.36□□□□□ -0.11
HERC2O95714 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HERC2O95714 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HERC2O95714 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HERC2O95714 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.36□□□□□ -0.11
HERC2O95714 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HERC2O95714 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HERC2O95714 KRT18P11-201ENST00000435214 1283 ntBASIC14.36□□□□□ -0.11
HERC2O95714 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC14.36□□□□□ -0.11
HERC2O95714 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.36□□□□□ -0.11
HERC2O95714 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HERC2O95714 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HERC2O95714 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC14.36□□□□□ -0.11
HERC2O95714 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms