Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNRNP200O75643 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.74■■□□□ 1.07
SNRNP200O75643 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.74■■□□□ 1.07
SNRNP200O75643 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNRNP200O75643 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNRNP200O75643 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNRNP200O75643 SUDS3P1-201ENST00000505831 966 ntBASIC21.73■■□□□ 1.07
SNRNP200O75643 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.73■■□□□ 1.07
SNRNP200O75643 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.73■■□□□ 1.07
SNRNP200O75643 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SNRNP200O75643 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNRNP200O75643 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.73■■□□□ 1.07
SNRNP200O75643 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SNRNP200O75643 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.73■■□□□ 1.07
SNRNP200O75643 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SNRNP200O75643 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.72■■□□□ 1.07
SNRNP200O75643 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNRNP200O75643 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SNRNP200O75643 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
SNRNP200O75643 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.72■■□□□ 1.07
SNRNP200O75643 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.71■■□□□ 1.07
SNRNP200O75643 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.71■■□□□ 1.07
SNRNP200O75643 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SNRNP200O75643 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNRNP200O75643 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.71■■□□□ 1.07
SNRNP200O75643 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNRNP200O75643 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNRNP200O75643 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.71■■□□□ 1.07
SNRNP200O75643 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SNRNP200O75643 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.7■■□□□ 1.07
SNRNP200O75643 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNRNP200O75643 AC006455.2-201ENST00000429931 906 ntBASIC21.7■■□□□ 1.06
SNRNP200O75643 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNRNP200O75643 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNRNP200O75643 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.7■■□□□ 1.06
SNRNP200O75643 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNRNP200O75643 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNRNP200O75643 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNRNP200O75643 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNRNP200O75643 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNRNP200O75643 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNRNP200O75643 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.7■■□□□ 1.06
SNRNP200O75643 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNRNP200O75643 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNRNP200O75643 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.7■■□□□ 1.06
SNRNP200O75643 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNRNP200O75643 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.69■■□□□ 1.06
SNRNP200O75643 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNRNP200O75643 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNRNP200O75643 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNRNP200O75643 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SNRNP200O75643 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SNRNP200O75643 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SNRNP200O75643 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
SNRNP200O75643 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.69■■□□□ 1.06
SNRNP200O75643 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNRNP200O75643 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SNRNP200O75643 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNRNP200O75643 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNRNP200O75643 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
SNRNP200O75643 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
SNRNP200O75643 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.68■■□□□ 1.06
SNRNP200O75643 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.68■■□□□ 1.06
SNRNP200O75643 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.68■■□□□ 1.06
SNRNP200O75643 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNRNP200O75643 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNRNP200O75643 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.67■■□□□ 1.06
SNRNP200O75643 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNRNP200O75643 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNRNP200O75643 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SNRNP200O75643 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNRNP200O75643 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
SNRNP200O75643 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SNRNP200O75643 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNRNP200O75643 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
SNRNP200O75643 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNRNP200O75643 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
SNRNP200O75643 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SNRNP200O75643 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.66■■□□□ 1.06
SNRNP200O75643 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.66■■□□□ 1.06
SNRNP200O75643 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNRNP200O75643 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNRNP200O75643 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.66■■□□□ 1.06
SNRNP200O75643 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.66■■□□□ 1.06
SNRNP200O75643 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SNRNP200O75643 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNRNP200O75643 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNRNP200O75643 AC096631.2-201ENST00000436136 790 ntBASIC21.65■■□□□ 1.06
SNRNP200O75643 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNRNP200O75643 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNRNP200O75643 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNRNP200O75643 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNRNP200O75643 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.65■■□□□ 1.06
SNRNP200O75643 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SNRNP200O75643 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SNRNP200O75643 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SNRNP200O75643 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNRNP200O75643 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.64■■□□□ 1.05
SNRNP200O75643 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.64■■□□□ 1.05
SNRNP200O75643 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms