Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NPHS1O60500 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NPHS1O60500 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.06■■□□□ 1.12
NPHS1O60500 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NPHS1O60500 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
NPHS1O60500 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.05■■□□□ 1.12
NPHS1O60500 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
NPHS1O60500 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
NPHS1O60500 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NPHS1O60500 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.05■■□□□ 1.12
NPHS1O60500 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NPHS1O60500 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.04■■□□□ 1.12
NPHS1O60500 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NPHS1O60500 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NPHS1O60500 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NPHS1O60500 ESRRAP2-201ENST00000418437 1549 ntBASIC22.04■■□□□ 1.12
NPHS1O60500 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
NPHS1O60500 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
NPHS1O60500 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
NPHS1O60500 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NPHS1O60500 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NPHS1O60500 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NPHS1O60500 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NPHS1O60500 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NPHS1O60500 AC127496.7-201ENST00000625110 1798 ntBASIC22.03■■□□□ 1.12
NPHS1O60500 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.03■■□□□ 1.12
NPHS1O60500 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.03■■□□□ 1.12
NPHS1O60500 LINC00565-201ENST00000562710 2331 ntBASIC22.03■■□□□ 1.12
NPHS1O60500 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
NPHS1O60500 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NPHS1O60500 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.03■■□□□ 1.12
NPHS1O60500 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
NPHS1O60500 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NPHS1O60500 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NPHS1O60500 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.02■■□□□ 1.12
NPHS1O60500 AC079630.1-202ENST00000618127 1840 ntBASIC22.02■■□□□ 1.12
NPHS1O60500 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NPHS1O60500 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NPHS1O60500 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NPHS1O60500 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.02■■□□□ 1.11
NPHS1O60500 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
NPHS1O60500 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
NPHS1O60500 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
NPHS1O60500 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.01■■□□□ 1.11
NPHS1O60500 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.01■■□□□ 1.11
NPHS1O60500 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.01■■□□□ 1.11
NPHS1O60500 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.01■■□□□ 1.11
NPHS1O60500 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
NPHS1O60500 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.01■■□□□ 1.11
NPHS1O60500 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NPHS1O60500 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NPHS1O60500 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NPHS1O60500 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NPHS1O60500 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NPHS1O60500 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
NPHS1O60500 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NPHS1O60500 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22■■□□□ 1.11
NPHS1O60500 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22■■□□□ 1.11
NPHS1O60500 AC139795.1-202ENST00000500444 432 ntBASIC22■■□□□ 1.11
NPHS1O60500 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22■■□□□ 1.11
NPHS1O60500 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22■■□□□ 1.11
NPHS1O60500 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22■■□□□ 1.11
NPHS1O60500 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NPHS1O60500 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
NPHS1O60500 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NPHS1O60500 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NPHS1O60500 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NPHS1O60500 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
NPHS1O60500 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NPHS1O60500 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.99■■□□□ 1.11
NPHS1O60500 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
NPHS1O60500 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
NPHS1O60500 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NPHS1O60500 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
NPHS1O60500 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
NPHS1O60500 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.99■■□□□ 1.11
NPHS1O60500 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.99■■□□□ 1.11
NPHS1O60500 AC120024.1-201ENST00000562672 995 ntBASIC21.99■■□□□ 1.11
NPHS1O60500 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NPHS1O60500 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NPHS1O60500 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NPHS1O60500 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.98■■□□□ 1.11
NPHS1O60500 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NPHS1O60500 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NPHS1O60500 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.98■■□□□ 1.11
NPHS1O60500 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.98■■□□□ 1.11
NPHS1O60500 HSD17B1P1-201ENST00000590052 955 ntBASIC21.98■■□□□ 1.11
NPHS1O60500 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
NPHS1O60500 AF131216.4-201ENST00000638924 1588 ntBASIC21.98■■□□□ 1.11
NPHS1O60500 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NPHS1O60500 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NPHS1O60500 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NPHS1O60500 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NPHS1O60500 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.97■■□□□ 1.11
NPHS1O60500 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.97■■□□□ 1.11
NPHS1O60500 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.97■■□□□ 1.11
NPHS1O60500 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NPHS1O60500 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.97■■□□□ 1.11
NPHS1O60500 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
NPHS1O60500 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms