Protein–RNA interactions for Protein: O43759

SYNGR1, Synaptogyrin-1, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1O43759 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
SYNGR1O43759 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNGR1O43759 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.2■□□□□ 0.66
SYNGR1O43759 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SYNGR1O43759 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNGR1O43759 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNGR1O43759 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.19■□□□□ 0.66
SYNGR1O43759 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNGR1O43759 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SYNGR1O43759 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNGR1O43759 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNGR1O43759 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SYNGR1O43759 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SYNGR1O43759 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.19■□□□□ 0.66
SYNGR1O43759 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.19■□□□□ 0.66
SYNGR1O43759 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNGR1O43759 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SYNGR1O43759 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.19■□□□□ 0.66
SYNGR1O43759 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SYNGR1O43759 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNGR1O43759 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.19■□□□□ 0.66
SYNGR1O43759 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SYNGR1O43759 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SYNGR1O43759 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYNGR1O43759 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYNGR1O43759 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.18■□□□□ 0.66
SYNGR1O43759 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYNGR1O43759 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.18■□□□□ 0.66
SYNGR1O43759 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYNGR1O43759 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SYNGR1O43759 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.18■□□□□ 0.66
SYNGR1O43759 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.18■□□□□ 0.66
SYNGR1O43759 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SYNGR1O43759 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SYNGR1O43759 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.17■□□□□ 0.66
SYNGR1O43759 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
SYNGR1O43759 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SYNGR1O43759 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SYNGR1O43759 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.17■□□□□ 0.66
SYNGR1O43759 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SYNGR1O43759 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.17■□□□□ 0.66
SYNGR1O43759 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.17■□□□□ 0.66
SYNGR1O43759 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SYNGR1O43759 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SYNGR1O43759 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNGR1O43759 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
SYNGR1O43759 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SYNGR1O43759 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.16■□□□□ 0.66
SYNGR1O43759 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.16■□□□□ 0.66
SYNGR1O43759 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
SYNGR1O43759 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.16■□□□□ 0.66
SYNGR1O43759 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNGR1O43759 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.16■□□□□ 0.66
SYNGR1O43759 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.16■□□□□ 0.66
SYNGR1O43759 AL451085.2-201ENST00000605085 799 ntBASIC19.16■□□□□ 0.66
SYNGR1O43759 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNGR1O43759 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNGR1O43759 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SYNGR1O43759 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.16■□□□□ 0.66
SYNGR1O43759 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SYNGR1O43759 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.15■□□□□ 0.66
SYNGR1O43759 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNGR1O43759 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNGR1O43759 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SYNGR1O43759 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SYNGR1O43759 DUSP8P3-201ENST00000399571 1760 ntBASIC19.15■□□□□ 0.66
SYNGR1O43759 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNGR1O43759 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SYNGR1O43759 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNGR1O43759 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNGR1O43759 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNGR1O43759 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNGR1O43759 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNGR1O43759 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
SYNGR1O43759 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNGR1O43759 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SYNGR1O43759 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.14■□□□□ 0.65
SYNGR1O43759 AC009299.2-201ENST00000482477 511 ntBASIC19.14■□□□□ 0.65
SYNGR1O43759 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.14■□□□□ 0.65
SYNGR1O43759 KRT125P-201ENST00000546827 989 ntBASIC19.14■□□□□ 0.65
SYNGR1O43759 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.14■□□□□ 0.65
SYNGR1O43759 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNGR1O43759 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNGR1O43759 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNGR1O43759 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.13■□□□□ 0.65
SYNGR1O43759 Z92544.1-202ENST00000571933 1220 ntBASIC19.13■□□□□ 0.65
SYNGR1O43759 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYNGR1O43759 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.13■□□□□ 0.65
SYNGR1O43759 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.13■□□□□ 0.65
SYNGR1O43759 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
SYNGR1O43759 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SYNGR1O43759 AC079630.1-202ENST00000618127 1840 ntBASIC19.13■□□□□ 0.65
SYNGR1O43759 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SYNGR1O43759 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
SYNGR1O43759 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYNGR1O43759 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SYNGR1O43759 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYNGR1O43759 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SYNGR1O43759 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.12■□□□□ 0.65
SYNGR1O43759 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms