Protein–RNA interactions for Protein: O15370

SOX12, Transcription factor SOX-12, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX12O15370 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SOX12O15370 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC30.67■■■□□ 2.5
SOX12O15370 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
SOX12O15370 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SOX12O15370 GTSE1-AS1-202ENST00000623117 1518 ntBASIC30.67■■■□□ 2.5
SOX12O15370 ALDH1A3-203ENST00000557963 1670 ntBASIC30.66■■■□□ 2.5
SOX12O15370 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SOX12O15370 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
SOX12O15370 SNX3-202ENST00000349379 890 ntTSL 2 BASIC30.65■■■□□ 2.5
SOX12O15370 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC30.65■■■□□ 2.5
SOX12O15370 MPST-208ENST00000628507 698 ntTSL 5 BASIC30.65■■■□□ 2.5
SOX12O15370 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
SOX12O15370 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
SOX12O15370 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SOX12O15370 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SOX12O15370 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC30.64■■■□□ 2.5
SOX12O15370 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SOX12O15370 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC30.64■■■□□ 2.5
SOX12O15370 AL031602.1-201ENST00000633169 911 ntBASIC30.64■■■□□ 2.5
SOX12O15370 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SOX12O15370 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
SOX12O15370 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC30.63■■■□□ 2.49
SOX12O15370 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
SOX12O15370 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
SOX12O15370 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SOX12O15370 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SOX12O15370 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
SOX12O15370 TMEM202-AS1-202ENST00000565181 2325 ntBASIC30.62■■■□□ 2.49
SOX12O15370 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SOX12O15370 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
SOX12O15370 HACD1-201ENST00000326961 773 ntTSL 2 BASIC30.62■■■□□ 2.49
SOX12O15370 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
SOX12O15370 SLC47A1P1-202ENST00000449666 945 ntBASIC30.62■■■□□ 2.49
SOX12O15370 TSPY26P-201ENST00000476365 1326 ntBASIC30.62■■■□□ 2.49
SOX12O15370 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SOX12O15370 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC30.62■■■□□ 2.49
SOX12O15370 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SOX12O15370 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SOX12O15370 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC30.61■■■□□ 2.49
SOX12O15370 IKBKGP1-201ENST00000612193 1073 ntBASIC30.61■■■□□ 2.49
SOX12O15370 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC30.61■■■□□ 2.49
SOX12O15370 EI24-204ENST00000527235 1625 ntTSL 5 BASIC30.61■■■□□ 2.49
SOX12O15370 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
SOX12O15370 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
SOX12O15370 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
SOX12O15370 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC30.6■■■□□ 2.49
SOX12O15370 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
SOX12O15370 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SOX12O15370 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SOX12O15370 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SOX12O15370 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC30.59■■■□□ 2.49
SOX12O15370 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
SOX12O15370 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC30.58■■■□□ 2.49
SOX12O15370 AC022211.4-201ENST00000625094 2161 ntBASIC30.58■■■□□ 2.49
SOX12O15370 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC30.58■■■□□ 2.49
SOX12O15370 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC30.58■■■□□ 2.49
SOX12O15370 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC30.58■■■□□ 2.49
SOX12O15370 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SOX12O15370 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SOX12O15370 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC30.57■■■□□ 2.48
SOX12O15370 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC30.57■■■□□ 2.48
SOX12O15370 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC30.57■■■□□ 2.48
SOX12O15370 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
SOX12O15370 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
SOX12O15370 ASB1-202ENST00000409297 878 ntTSL 5 BASIC30.57■■■□□ 2.48
SOX12O15370 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC30.57■■■□□ 2.48
SOX12O15370 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SOX12O15370 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.48
SOX12O15370 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
SOX12O15370 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC30.56■■■□□ 2.48
SOX12O15370 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SOX12O15370 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SOX12O15370 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC30.56■■■□□ 2.48
SOX12O15370 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
SOX12O15370 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
SOX12O15370 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SOX12O15370 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC30.56■■■□□ 2.48
SOX12O15370 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC30.55■■■□□ 2.48
SOX12O15370 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
SOX12O15370 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SOX12O15370 AK1-201ENST00000223836 736 ntTSL 3 BASIC30.55■■■□□ 2.48
SOX12O15370 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SOX12O15370 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC30.55■■■□□ 2.48
SOX12O15370 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SOX12O15370 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC30.55■■■□□ 2.48
SOX12O15370 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC30.55■■■□□ 2.48
SOX12O15370 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC30.55■■■□□ 2.48
SOX12O15370 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
SOX12O15370 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC30.54■■■□□ 2.48
SOX12O15370 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC30.54■■■□□ 2.48
SOX12O15370 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC30.54■■■□□ 2.48
SOX12O15370 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SOX12O15370 MIR6084-201ENST00000622012 110 ntBASIC30.54■■■□□ 2.48
SOX12O15370 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
SOX12O15370 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SOX12O15370 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SOX12O15370 SHF-207ENST00000560540 2062 ntTSL 5 BASIC30.53■■■□□ 2.48
SOX12O15370 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC30.53■■■□□ 2.48
SOX12O15370 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SOX12O15370 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms