Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 AC091305.1-201ENST00000479476 895 ntBASIC22.73■■□□□ 1.23
MID1O15344 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
MID1O15344 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.73■■□□□ 1.23
MID1O15344 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.73■■□□□ 1.23
MID1O15344 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
MID1O15344 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
MID1O15344 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
MID1O15344 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.72■■□□□ 1.23
MID1O15344 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
MID1O15344 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.72■■□□□ 1.23
MID1O15344 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
MID1O15344 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
MID1O15344 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
MID1O15344 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
MID1O15344 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.72■■□□□ 1.23
MID1O15344 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.72■■□□□ 1.23
MID1O15344 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.72■■□□□ 1.23
MID1O15344 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
MID1O15344 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
MID1O15344 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
MID1O15344 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
MID1O15344 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
MID1O15344 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
MID1O15344 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.71■■□□□ 1.23
MID1O15344 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.71■■□□□ 1.23
MID1O15344 MIR3181-201ENST00000578512 73 ntBASIC22.71■■□□□ 1.23
MID1O15344 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
MID1O15344 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
MID1O15344 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.71■■□□□ 1.23
MID1O15344 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
MID1O15344 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.23
MID1O15344 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
MID1O15344 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
MID1O15344 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
MID1O15344 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
MID1O15344 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.7■■□□□ 1.22
MID1O15344 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.7■■□□□ 1.22
MID1O15344 AC008764.7-201ENST00000593779 1081 ntBASIC22.7■■□□□ 1.22
MID1O15344 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.7■■□□□ 1.22
MID1O15344 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.7■■□□□ 1.22
MID1O15344 AC136469.2-201ENST00000623944 1028 ntBASIC22.7■■□□□ 1.22
MID1O15344 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.7■■□□□ 1.22
MID1O15344 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
MID1O15344 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.69■■□□□ 1.22
MID1O15344 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
MID1O15344 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
MID1O15344 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.69■■□□□ 1.22
MID1O15344 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.69■■□□□ 1.22
MID1O15344 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
MID1O15344 CA15P2-201ENST00000611168 834 ntBASIC22.69■■□□□ 1.22
MID1O15344 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
MID1O15344 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
MID1O15344 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
MID1O15344 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
MID1O15344 RASA4CP-201ENST00000424092 1398 ntBASIC22.68■■□□□ 1.22
MID1O15344 AC027682.1-201ENST00000562846 899 ntBASIC22.68■■□□□ 1.22
MID1O15344 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
MID1O15344 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
MID1O15344 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
MID1O15344 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
MID1O15344 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
MID1O15344 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.67■■□□□ 1.22
MID1O15344 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
MID1O15344 RARRES2P6-201ENST00000567333 442 ntBASIC22.67■■□□□ 1.22
MID1O15344 pRNA.6-201ENST00000610482 90 ntBASIC22.67■■□□□ 1.22
MID1O15344 pRNA.5-201ENST00000612139 90 ntBASIC22.67■■□□□ 1.22
MID1O15344 pRNA.11-201ENST00000618423 90 ntBASIC22.67■■□□□ 1.22
MID1O15344 pRNA.13-201ENST00000619112 90 ntBASIC22.67■■□□□ 1.22
MID1O15344 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.67■■□□□ 1.22
MID1O15344 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
MID1O15344 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
MID1O15344 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MID1O15344 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MID1O15344 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.66■■□□□ 1.22
MID1O15344 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
MID1O15344 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MID1O15344 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.66■■□□□ 1.22
MID1O15344 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MID1O15344 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
MID1O15344 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.66■■□□□ 1.22
MID1O15344 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MID1O15344 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.65■■□□□ 1.22
MID1O15344 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
MID1O15344 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
MID1O15344 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
MID1O15344 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.65■■□□□ 1.22
MID1O15344 AC099791.1-201ENST00000416440 715 ntBASIC22.65■■□□□ 1.22
MID1O15344 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.65■■□□□ 1.22
MID1O15344 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
MID1O15344 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.65■■□□□ 1.22
MID1O15344 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
MID1O15344 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.65■■□□□ 1.22
MID1O15344 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
MID1O15344 AC141586.4-201ENST00000624558 1573 ntBASIC22.64■■□□□ 1.22
MID1O15344 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.64■■□□□ 1.21
MID1O15344 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
MID1O15344 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
MID1O15344 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
MID1O15344 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.64■■□□□ 1.21
MID1O15344 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms