Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PPM1DO15297 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PPM1DO15297 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PPM1DO15297 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PPM1DO15297 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PPM1DO15297 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.02■■□□□ 1.12
PPM1DO15297 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
PPM1DO15297 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PPM1DO15297 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PPM1DO15297 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PPM1DO15297 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.02■■□□□ 1.12
PPM1DO15297 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.02■■□□□ 1.12
PPM1DO15297 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PPM1DO15297 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PPM1DO15297 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.02■■□□□ 1.11
PPM1DO15297 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
PPM1DO15297 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PPM1DO15297 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PPM1DO15297 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PPM1DO15297 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PPM1DO15297 LINC00543-201ENST00000567234 1845 ntBASIC22.01■■□□□ 1.11
PPM1DO15297 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PPM1DO15297 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
PPM1DO15297 ZNRF2P3-201ENST00000424200 374 ntBASIC22■■□□□ 1.11
PPM1DO15297 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22■■□□□ 1.11
PPM1DO15297 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22■■□□□ 1.11
PPM1DO15297 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
PPM1DO15297 AC004812.2-201ENST00000611079 2094 ntBASIC22■■□□□ 1.11
PPM1DO15297 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22■■□□□ 1.11
PPM1DO15297 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22■■□□□ 1.11
PPM1DO15297 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
PPM1DO15297 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.99■■□□□ 1.11
PPM1DO15297 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.99■■□□□ 1.11
PPM1DO15297 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.99■■□□□ 1.11
PPM1DO15297 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
PPM1DO15297 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PPM1DO15297 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PPM1DO15297 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.99■■□□□ 1.11
PPM1DO15297 AL136967.2-201ENST00000623968 743 ntBASIC21.99■■□□□ 1.11
PPM1DO15297 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.99■■□□□ 1.11
PPM1DO15297 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PPM1DO15297 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PPM1DO15297 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PPM1DO15297 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
PPM1DO15297 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.98■■□□□ 1.11
PPM1DO15297 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.98■■□□□ 1.11
PPM1DO15297 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.98■■□□□ 1.11
PPM1DO15297 MIR4767-201ENST00000582827 78 ntBASIC21.98■■□□□ 1.11
PPM1DO15297 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.98■■□□□ 1.11
PPM1DO15297 AC241377.3-202ENST00000626088 1088 ntBASIC21.98■■□□□ 1.11
PPM1DO15297 AC241585.3-202ENST00000628937 1088 ntBASIC21.98■■□□□ 1.11
PPM1DO15297 AC245100.8-202ENST00000629247 1058 ntBASIC21.98■■□□□ 1.11
PPM1DO15297 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PPM1DO15297 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PPM1DO15297 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
PPM1DO15297 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
PPM1DO15297 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.98■■□□□ 1.11
PPM1DO15297 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PPM1DO15297 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
PPM1DO15297 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.97■■□□□ 1.11
PPM1DO15297 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PPM1DO15297 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PPM1DO15297 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PPM1DO15297 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PPM1DO15297 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PPM1DO15297 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PPM1DO15297 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PPM1DO15297 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.96■■□□□ 1.11
PPM1DO15297 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.96■■□□□ 1.11
PPM1DO15297 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PPM1DO15297 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PPM1DO15297 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PPM1DO15297 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PPM1DO15297 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PPM1DO15297 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.96■■□□□ 1.11
PPM1DO15297 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.96■■□□□ 1.11
PPM1DO15297 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PPM1DO15297 AC006455.2-201ENST00000429931 906 ntBASIC21.96■■□□□ 1.11
PPM1DO15297 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PPM1DO15297 AF213884.3-201ENST00000563833 479 ntBASIC21.96■■□□□ 1.11
PPM1DO15297 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
PPM1DO15297 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PPM1DO15297 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PPM1DO15297 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PPM1DO15297 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.11
PPM1DO15297 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPM1DO15297 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.95■■□□□ 1.1
PPM1DO15297 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPM1DO15297 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PPM1DO15297 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPM1DO15297 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPM1DO15297 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PPM1DO15297 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PPM1DO15297 MIR939-201ENST00000401314 82 ntBASIC21.94■■□□□ 1.1
PPM1DO15297 AP001330.3-201ENST00000520123 633 ntBASIC21.94■■□□□ 1.1
PPM1DO15297 AL138724.1-201ENST00000606771 1088 ntBASIC21.94■■□□□ 1.1
PPM1DO15297 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.94■■□□□ 1.1
PPM1DO15297 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PPM1DO15297 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.94■■□□□ 1.1
PPM1DO15297 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms