Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21■□□□□ 0.95
AP3D1O14617 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP3D1O14617 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP3D1O14617 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP3D1O14617 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP3D1O14617 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.99■□□□□ 0.95
AP3D1O14617 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP3D1O14617 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP3D1O14617 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP3D1O14617 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.99■□□□□ 0.95
AP3D1O14617 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP3D1O14617 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.99■□□□□ 0.95
AP3D1O14617 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP3D1O14617 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP3D1O14617 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP3D1O14617 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP3D1O14617 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP3D1O14617 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP3D1O14617 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
AP3D1O14617 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP3D1O14617 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP3D1O14617 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP3D1O14617 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
AP3D1O14617 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.98■□□□□ 0.95
AP3D1O14617 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.98■□□□□ 0.95
AP3D1O14617 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.98■□□□□ 0.95
AP3D1O14617 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP3D1O14617 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.98■□□□□ 0.95
AP3D1O14617 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP3D1O14617 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
AP3D1O14617 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP3D1O14617 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
AP3D1O14617 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.97■□□□□ 0.95
AP3D1O14617 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
AP3D1O14617 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP3D1O14617 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP3D1O14617 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.97■□□□□ 0.95
AP3D1O14617 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP3D1O14617 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP3D1O14617 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP3D1O14617 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP3D1O14617 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
AP3D1O14617 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP3D1O14617 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP3D1O14617 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
AP3D1O14617 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.96■□□□□ 0.95
AP3D1O14617 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
AP3D1O14617 ANOS2P-203ENST00000472227 1816 ntBASIC20.96■□□□□ 0.95
AP3D1O14617 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP3D1O14617 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
AP3D1O14617 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP3D1O14617 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.96■□□□□ 0.95
AP3D1O14617 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP3D1O14617 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.96■□□□□ 0.95
AP3D1O14617 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.96■□□□□ 0.95
AP3D1O14617 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP3D1O14617 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3D1O14617 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.95■□□□□ 0.94
AP3D1O14617 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3D1O14617 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3D1O14617 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3D1O14617 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.95■□□□□ 0.94
AP3D1O14617 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3D1O14617 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.95■□□□□ 0.94
AP3D1O14617 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3D1O14617 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3D1O14617 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.95■□□□□ 0.94
AP3D1O14617 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3D1O14617 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.95■□□□□ 0.94
AP3D1O14617 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3D1O14617 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.95■□□□□ 0.94
AP3D1O14617 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3D1O14617 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3D1O14617 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
AP3D1O14617 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
AP3D1O14617 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP3D1O14617 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
AP3D1O14617 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
AP3D1O14617 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP3D1O14617 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AP3D1O14617 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
AP3D1O14617 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AP3D1O14617 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AP3D1O14617 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP3D1O14617 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
AP3D1O14617 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
AP3D1O14617 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP3D1O14617 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.93■□□□□ 0.94
AP3D1O14617 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
AP3D1O14617 AL031848.2-201ENST00000607670 837 ntBASIC20.93■□□□□ 0.94
AP3D1O14617 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
AP3D1O14617 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP3D1O14617 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP3D1O14617 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.93■□□□□ 0.94
AP3D1O14617 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3D1O14617 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3D1O14617 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.92■□□□□ 0.94
AP3D1O14617 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3D1O14617 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3D1O14617 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms