Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.12■□□□□ 0.49
UPK2O00526 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.12■□□□□ 0.49
UPK2O00526 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.12■□□□□ 0.49
UPK2O00526 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
UPK2O00526 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
UPK2O00526 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.12■□□□□ 0.49
UPK2O00526 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.11■□□□□ 0.49
UPK2O00526 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UPK2O00526 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.11■□□□□ 0.49
UPK2O00526 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPK2O00526 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UPK2O00526 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
UPK2O00526 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK2O00526 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK2O00526 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK2O00526 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UPK2O00526 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
UPK2O00526 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.1■□□□□ 0.49
UPK2O00526 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK2O00526 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UPK2O00526 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.1■□□□□ 0.49
UPK2O00526 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UPK2O00526 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.1■□□□□ 0.49
UPK2O00526 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UPK2O00526 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UPK2O00526 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
UPK2O00526 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
UPK2O00526 MIR4508-201ENST00000584178 70 ntBASIC18.1■□□□□ 0.49
UPK2O00526 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK2O00526 AC012354.3-201ENST00000623734 483 ntBASIC18.1■□□□□ 0.49
UPK2O00526 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK2O00526 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
UPK2O00526 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPK2O00526 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.09■□□□□ 0.49
UPK2O00526 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UPK2O00526 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UPK2O00526 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
UPK2O00526 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPK2O00526 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPK2O00526 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPK2O00526 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.09■□□□□ 0.49
UPK2O00526 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPK2O00526 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.09■□□□□ 0.49
UPK2O00526 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPK2O00526 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPK2O00526 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPK2O00526 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.09■□□□□ 0.49
UPK2O00526 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
UPK2O00526 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
UPK2O00526 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
UPK2O00526 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.08■□□□□ 0.49
UPK2O00526 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UPK2O00526 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
UPK2O00526 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.08■□□□□ 0.48
UPK2O00526 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.08■□□□□ 0.48
UPK2O00526 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
UPK2O00526 AC233723.2-201ENST00000623798 2106 ntBASIC18.08■□□□□ 0.48
UPK2O00526 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPK2O00526 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.08■□□□□ 0.48
UPK2O00526 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPK2O00526 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
UPK2O00526 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPK2O00526 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPK2O00526 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.07■□□□□ 0.48
UPK2O00526 AL117328.2-201ENST00000624617 1940 ntBASIC18.07■□□□□ 0.48
UPK2O00526 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.07■□□□□ 0.48
UPK2O00526 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPK2O00526 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPK2O00526 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.07■□□□□ 0.48
UPK2O00526 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPK2O00526 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UPK2O00526 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UPK2O00526 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UPK2O00526 C1orf229-201ENST00000623686 2258 ntBASIC18.06■□□□□ 0.48
UPK2O00526 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPK2O00526 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.06■□□□□ 0.48
UPK2O00526 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.06■□□□□ 0.48
UPK2O00526 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.06■□□□□ 0.48
UPK2O00526 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.06■□□□□ 0.48
UPK2O00526 AL033527.3-201ENST00000566366 1196 ntBASIC18.06■□□□□ 0.48
UPK2O00526 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.06■□□□□ 0.48
UPK2O00526 AC079630.1-202ENST00000618127 1840 ntBASIC18.06■□□□□ 0.48
UPK2O00526 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
UPK2O00526 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPK2O00526 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
UPK2O00526 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
UPK2O00526 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
UPK2O00526 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPK2O00526 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.05■□□□□ 0.48
UPK2O00526 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPK2O00526 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPK2O00526 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UPK2O00526 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPK2O00526 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPK2O00526 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UPK2O00526 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UPK2O00526 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.05■□□□□ 0.48
UPK2O00526 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.05■□□□□ 0.48
UPK2O00526 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPK2O00526 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms