Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 MIR4449-201ENST00000578365 66 ntBASIC16.76■□□□□ 0.27
IGKV3D-20A0A0C4DH25 AC087393.1-201ENST00000582896 145 ntBASIC16.76■□□□□ 0.27
IGKV3D-20A0A0C4DH25 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
IGKV3D-20A0A0C4DH25 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IGKV3D-20A0A0C4DH25 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IGKV3D-20A0A0C4DH25 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IGKV3D-20A0A0C4DH25 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC16.76■□□□□ 0.27
IGKV3D-20A0A0C4DH25 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IGKV3D-20A0A0C4DH25 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IGKV3D-20A0A0C4DH25 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
IGKV3D-20A0A0C4DH25 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
IGKV3D-20A0A0C4DH25 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IGKV3D-20A0A0C4DH25 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.76■□□□□ 0.27
IGKV3D-20A0A0C4DH25 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IGKV3D-20A0A0C4DH25 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IGKV3D-20A0A0C4DH25 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IGKV3D-20A0A0C4DH25 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IGKV3D-20A0A0C4DH25 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IGKV3D-20A0A0C4DH25 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.75■□□□□ 0.27
IGKV3D-20A0A0C4DH25 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IGKV3D-20A0A0C4DH25 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IGKV3D-20A0A0C4DH25 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
IGKV3D-20A0A0C4DH25 AL022069.1-201ENST00000568025 1636 ntBASIC16.75■□□□□ 0.27
IGKV3D-20A0A0C4DH25 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.75■□□□□ 0.27
IGKV3D-20A0A0C4DH25 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
IGKV3D-20A0A0C4DH25 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IGKV3D-20A0A0C4DH25 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
IGKV3D-20A0A0C4DH25 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
IGKV3D-20A0A0C4DH25 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IGKV3D-20A0A0C4DH25 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IGKV3D-20A0A0C4DH25 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IGKV3D-20A0A0C4DH25 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
IGKV3D-20A0A0C4DH25 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC16.74■□□□□ 0.27
IGKV3D-20A0A0C4DH25 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IGKV3D-20A0A0C4DH25 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IGKV3D-20A0A0C4DH25 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IGKV3D-20A0A0C4DH25 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
IGKV3D-20A0A0C4DH25 AL592293.1-201ENST00000502889 1188 ntBASIC16.74■□□□□ 0.27
IGKV3D-20A0A0C4DH25 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
IGKV3D-20A0A0C4DH25 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC16.74■□□□□ 0.27
IGKV3D-20A0A0C4DH25 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IGKV3D-20A0A0C4DH25 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IGKV3D-20A0A0C4DH25 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
IGKV3D-20A0A0C4DH25 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IGKV3D-20A0A0C4DH25 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IGKV3D-20A0A0C4DH25 GUSBP5-202ENST00000510805 1989 ntBASIC16.73■□□□□ 0.27
IGKV3D-20A0A0C4DH25 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
IGKV3D-20A0A0C4DH25 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
IGKV3D-20A0A0C4DH25 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC16.73■□□□□ 0.27
IGKV3D-20A0A0C4DH25 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC16.73■□□□□ 0.27
IGKV3D-20A0A0C4DH25 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
IGKV3D-20A0A0C4DH25 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
IGKV3D-20A0A0C4DH25 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
IGKV3D-20A0A0C4DH25 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
IGKV3D-20A0A0C4DH25 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
IGKV3D-20A0A0C4DH25 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IGKV3D-20A0A0C4DH25 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IGKV3D-20A0A0C4DH25 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
IGKV3D-20A0A0C4DH25 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IGKV3D-20A0A0C4DH25 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
IGKV3D-20A0A0C4DH25 IDNK-203ENST00000405990 629 ntTSL 2 BASIC16.72■□□□□ 0.27
IGKV3D-20A0A0C4DH25 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC16.72■□□□□ 0.27
IGKV3D-20A0A0C4DH25 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
IGKV3D-20A0A0C4DH25 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IGKV3D-20A0A0C4DH25 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IGKV3D-20A0A0C4DH25 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IGKV3D-20A0A0C4DH25 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
IGKV3D-20A0A0C4DH25 LINC00526-201ENST00000581067 1875 ntBASIC16.71■□□□□ 0.27
IGKV3D-20A0A0C4DH25 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IGKV3D-20A0A0C4DH25 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
IGKV3D-20A0A0C4DH25 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IGKV3D-20A0A0C4DH25 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IGKV3D-20A0A0C4DH25 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
IGKV3D-20A0A0C4DH25 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
IGKV3D-20A0A0C4DH25 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
IGKV3D-20A0A0C4DH25 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IGKV3D-20A0A0C4DH25 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
IGKV3D-20A0A0C4DH25 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IGKV3D-20A0A0C4DH25 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
IGKV3D-20A0A0C4DH25 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IGKV3D-20A0A0C4DH25 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IGKV3D-20A0A0C4DH25 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IGKV3D-20A0A0C4DH25 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.71■□□□□ 0.26
IGKV3D-20A0A0C4DH25 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
IGKV3D-20A0A0C4DH25 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.7■□□□□ 0.26
IGKV3D-20A0A0C4DH25 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
IGKV3D-20A0A0C4DH25 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
IGKV3D-20A0A0C4DH25 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
IGKV3D-20A0A0C4DH25 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IGKV3D-20A0A0C4DH25 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IGKV3D-20A0A0C4DH25 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IGKV3D-20A0A0C4DH25 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
IGKV3D-20A0A0C4DH25 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.7■□□□□ 0.26
IGKV3D-20A0A0C4DH25 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IGKV3D-20A0A0C4DH25 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IGKV3D-20A0A0C4DH25 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC16.7■□□□□ 0.26
IGKV3D-20A0A0C4DH25 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IGKV3D-20A0A0C4DH25 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
IGKV3D-20A0A0C4DH25 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC16.7■□□□□ 0.26
IGKV3D-20A0A0C4DH25 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms