Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.31■□□□□ 0.68
TRAV6A0A075B6T7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
TRAV6A0A075B6T7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TRAV6A0A075B6T7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.31■□□□□ 0.68
TRAV6A0A075B6T7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.31■□□□□ 0.68
TRAV6A0A075B6T7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.31■□□□□ 0.68
TRAV6A0A075B6T7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV6A0A075B6T7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TRAV6A0A075B6T7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV6A0A075B6T7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAV6A0A075B6T7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV6A0A075B6T7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV6A0A075B6T7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV6A0A075B6T7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TRAV6A0A075B6T7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV6A0A075B6T7 AC073130.3-201ENST00000624389 2278 ntBASIC19.3■□□□□ 0.68
TRAV6A0A075B6T7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV6A0A075B6T7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.3■□□□□ 0.68
TRAV6A0A075B6T7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.3■□□□□ 0.68
TRAV6A0A075B6T7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.3■□□□□ 0.68
TRAV6A0A075B6T7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV6A0A075B6T7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.3■□□□□ 0.68
TRAV6A0A075B6T7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.3■□□□□ 0.68
TRAV6A0A075B6T7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.3■□□□□ 0.68
TRAV6A0A075B6T7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV6A0A075B6T7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV6A0A075B6T7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV6A0A075B6T7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV6A0A075B6T7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV6A0A075B6T7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV6A0A075B6T7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
TRAV6A0A075B6T7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
TRAV6A0A075B6T7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.29■□□□□ 0.68
TRAV6A0A075B6T7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV6A0A075B6T7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TRAV6A0A075B6T7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV6A0A075B6T7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV6A0A075B6T7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV6A0A075B6T7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV6A0A075B6T7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV6A0A075B6T7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV6A0A075B6T7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TRAV6A0A075B6T7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.29■□□□□ 0.68
TRAV6A0A075B6T7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.29■□□□□ 0.68
TRAV6A0A075B6T7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV6A0A075B6T7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TRAV6A0A075B6T7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV6A0A075B6T7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV6A0A075B6T7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV6A0A075B6T7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
TRAV6A0A075B6T7 AC148477.6-201ENST00000623746 465 ntBASIC19.28■□□□□ 0.68
TRAV6A0A075B6T7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.28■□□□□ 0.68
TRAV6A0A075B6T7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.28■□□□□ 0.68
TRAV6A0A075B6T7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.28■□□□□ 0.68
TRAV6A0A075B6T7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TRAV6A0A075B6T7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TRAV6A0A075B6T7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV6A0A075B6T7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV6A0A075B6T7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV6A0A075B6T7 AL121603.2-201ENST00000557373 2117 ntBASIC19.27■□□□□ 0.68
TRAV6A0A075B6T7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV6A0A075B6T7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TRAV6A0A075B6T7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV6A0A075B6T7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV6A0A075B6T7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.27■□□□□ 0.68
TRAV6A0A075B6T7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRAV6A0A075B6T7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRAV6A0A075B6T7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
TRAV6A0A075B6T7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV6A0A075B6T7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.26■□□□□ 0.67
TRAV6A0A075B6T7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.26■□□□□ 0.67
TRAV6A0A075B6T7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV6A0A075B6T7 MIR3665-201ENST00000578708 105 ntBASIC19.26■□□□□ 0.67
TRAV6A0A075B6T7 FBXW4P1-201ENST00000426721 2239 ntBASIC19.26■□□□□ 0.67
TRAV6A0A075B6T7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV6A0A075B6T7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV6A0A075B6T7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV6A0A075B6T7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV6A0A075B6T7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV6A0A075B6T7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.26■□□□□ 0.67
TRAV6A0A075B6T7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV6A0A075B6T7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TRAV6A0A075B6T7 AC008813.1-201ENST00000536597 885 ntBASIC19.25■□□□□ 0.67
TRAV6A0A075B6T7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV6A0A075B6T7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TRAV6A0A075B6T7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV6A0A075B6T7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV6A0A075B6T7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV6A0A075B6T7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TRAV6A0A075B6T7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV6A0A075B6T7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAV6A0A075B6T7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV6A0A075B6T7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV6A0A075B6T7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV6A0A075B6T7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAV6A0A075B6T7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TRAV6A0A075B6T7 C11orf96-202ENST00000528572 1834 ntBASIC19.24■□□□□ 0.67
TRAV6A0A075B6T7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRAV6A0A075B6T7 ESRRAP2-201ENST00000418437 1549 ntBASIC19.24■□□□□ 0.67
TRAV6A0A075B6T7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms