Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 RTN3P1-201ENST00000536295 711 ntBASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 PGAM1P5-201ENST00000548011 764 ntBASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 AC016629.1-201ENST00000596579 586 ntBASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 AL353770.1-201ENST00000614915 403 ntBASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLIP2Q9UDT6 APP-205ENST00000358918 2366 ntTSL 5 BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 OR2R1P-201ENST00000441404 914 ntBASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 ST13P19-201ENST00000442505 1124 ntBASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 AL353637.1-201ENST00000451571 732 ntBASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 POU5F1P2-201ENST00000521750 823 ntBASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 AC027237.1-201ENST00000560942 655 ntBASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 MIR3907-201ENST00000579424 151 ntBASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 MYADML-201ENST00000474610 2147 ntBASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CLIP2Q9UDT6 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 SRC-202ENST00000373558 4304 ntTSL 5 BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.02■□□□□ 0.32
CLIP2Q9UDT6 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms