Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 AC138894.2-201ENST00000602838 371 ntBASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 RN7SL736P-201ENST00000613111 269 ntBASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 YRDCP1-201ENST00000621419 643 ntBASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 MST1P2-201ENST00000457982 2291 ntBASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HDAC6Q9UBN7 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 AC074138.1-201ENST00000611182 1303 ntBASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 RPSAP31-201ENST00000416648 895 ntBASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 TSPY25P-201ENST00000429463 745 ntBASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 MIR4750-201ENST00000584564 56 ntBASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 MIR6842-201ENST00000612539 65 ntBASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 KRT8P28-201ENST00000433288 1390 ntBASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC16.23■□□□□ 0.19
HDAC6Q9UBN7 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 AC005252.3-201ENST00000623855 2258 ntBASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 AL590440.2-201ENST00000641973 1595 ntBASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 AP000356.3-201ENST00000382243 753 ntBASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HDAC6Q9UBN7 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms