Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 AC004837.1-201ENST00000446267 564 ntBASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 STK24P1-201ENST00000455035 1291 ntBASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 KRT18P15-201ENST00000458108 1291 ntBASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 NDUFB10P1-201ENST00000567319 521 ntBASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 SHMT1P1-201ENST00000419974 1312 ntBASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 DPY19L2P5-201ENST00000456300 331 ntBASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 HERC2P11-201ENST00000562845 725 ntBASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 AC100756.2-201ENST00000569537 736 ntBASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 CICP4-201ENST00000447359 2812 ntBASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC12.61□□□□□ -0.39
KIAA1549Q9HCM3 SALL4P6-201ENST00000429385 1691 ntBASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 RPL3P2-204ENST00000413027 1203 ntBASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 BX679664.3-201ENST00000414070 555 ntBASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 AC113935.1-201ENST00000471722 555 ntBASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 NT5C-204ENST00000578337 582 ntTSL 2 BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 AC087392.5-201ENST00000612517 489 ntBASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 AC019109.1-201ENST00000401725 1874 ntBASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
KIAA1549Q9HCM3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms