Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 MLN-202ENST00000430124 566 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 AL049542.1-201ENST00000430231 278 ntBASIC12.91□□□□□ -0.34
CHD8Q9HCK8 AL008719.1-201ENST00000430449 473 ntTSL 2 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 AC010163.1-201ENST00000434440 520 ntTSL 2 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 RN7SL646P-201ENST00000492969 297 ntBASIC12.91□□□□□ -0.34
CHD8Q9HCK8 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 HNRNPA1P11-201ENST00000580106 956 ntBASIC12.91□□□□□ -0.34
CHD8Q9HCK8 AC009779.7-201ENST00000609031 469 ntBASIC12.91□□□□□ -0.34
CHD8Q9HCK8 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 STK16-202ENST00000409260 1493 ntTSL 5 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 MIR345-201ENST00000362114 98 ntBASIC12.91□□□□□ -0.34
CHD8Q9HCK8 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 HNRNPA1P68-201ENST00000425806 979 ntBASIC12.91□□□□□ -0.34
CHD8Q9HCK8 AC073465.1-201ENST00000456671 464 ntBASIC12.91□□□□□ -0.34
CHD8Q9HCK8 BICD1P1-201ENST00000457832 1222 ntBASIC12.91□□□□□ -0.34
CHD8Q9HCK8 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 PTMAP5-202ENST00000607242 1162 ntBASIC12.91□□□□□ -0.34
CHD8Q9HCK8 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CHD8Q9HCK8 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 ABCA1-201ENST00000374733 923 ntTSL 2 BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 ACP1-207ENST00000439645 605 ntTSL 2 BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 YBX1P3-201ENST00000468366 909 ntBASIC12.9□□□□□ -0.34
CHD8Q9HCK8 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 HAX1-211ENST00000532105 771 ntTSL 3 BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 AC009166.1-201ENST00000570060 487 ntTSL 2 BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 AC010531.7-201ENST00000602665 465 ntTSL 3 BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 FAM230A-201ENST00000615181 315 ntTSL 5 BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 FAM90A27P-201ENST00000593323 1370 ntBASIC12.9□□□□□ -0.34
CHD8Q9HCK8 FAM90A28P-202ENST00000597191 1374 ntBASIC12.9□□□□□ -0.34
CHD8Q9HCK8 SALL4P6-201ENST00000429385 1691 ntBASIC12.9□□□□□ -0.34
CHD8Q9HCK8 DLX4-206ENST00000611342 1662 ntBASIC12.9□□□□□ -0.34
CHD8Q9HCK8 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 PBDC1-202ENST00000373358 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 AC145285.1-201ENST00000469929 694 ntBASIC12.9□□□□□ -0.34
CHD8Q9HCK8 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 AC017100.1-201ENST00000565978 1169 ntBASIC12.9□□□□□ -0.34
CHD8Q9HCK8 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CHD8Q9HCK8 CLUHP3-207ENST00000563678 1303 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms