Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 AL805961.2-201ENST00000642139 4817 ntBASIC12.16□□□□□ -0.46
SEC22CQ9BRL7 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
SEC22CQ9BRL7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SEC22CQ9BRL7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SEC22CQ9BRL7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SEC22CQ9BRL7 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.16□□□□□ -0.46
SEC22CQ9BRL7 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
SEC22CQ9BRL7 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SEC22CQ9BRL7 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SEC22CQ9BRL7 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SEC22CQ9BRL7 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 EIF3L-214ENST00000624234 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 LINC01165-201ENST00000445190 1623 ntBASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 TUBB3P1-201ENST00000405796 1332 ntBASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 AC064801.2-201ENST00000625052 1303 ntBASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 AC008620.2-201ENST00000510294 1569 ntBASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 AC022364.1-202ENST00000617468 2409 ntBASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 AK2P2-201ENST00000439142 405 ntBASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 RNA5SP419-201ENST00000515908 135 ntBASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 AL662844.1-201ENST00000546340 181 ntBASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 AL138799.1-201ENST00000448213 1675 ntBASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.15□□□□□ -0.46
SEC22CQ9BRL7 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
SEC22CQ9BRL7 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SEC22CQ9BRL7 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
SEC22CQ9BRL7 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SEC22CQ9BRL7 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.47
SEC22CQ9BRL7 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.15□□□□□ -0.47
SEC22CQ9BRL7 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
SEC22CQ9BRL7 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 PTGR2-205ENST00000555661 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.14□□□□□ -0.47
SEC22CQ9BRL7 AC003958.1-201ENST00000435883 421 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms