Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
RAB40CQ96S21 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC11.7□□□□□ -0.54
RAB40CQ96S21 AP005019.2-201ENST00000615104 511 ntBASIC11.7□□□□□ -0.54
RAB40CQ96S21 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC11.7□□□□□ -0.54
RAB40CQ96S21 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC11.7□□□□□ -0.54
RAB40CQ96S21 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
RAB40CQ96S21 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 OS9-206ENST00000435406 2346 ntTSL 2 BASIC11.7□□□□□ -0.54
RAB40CQ96S21 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 AC010970.1-201ENST00000445125 1848 ntBASIC11.7□□□□□ -0.54
RAB40CQ96S21 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 AL589987.1-201ENST00000453380 819 ntBASIC11.69□□□□□ -0.54
RAB40CQ96S21 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 RRP7BP-205ENST00000566851 833 ntBASIC11.69□□□□□ -0.54
RAB40CQ96S21 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 PDIA3P1-201ENST00000471856 1510 ntBASIC11.69□□□□□ -0.54
RAB40CQ96S21 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 AGER-206ENST00000375070 1463 ntTSL 5 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
RAB40CQ96S21 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC11.69□□□□□ -0.54
RAB40CQ96S21 AC009093.10-201ENST00000641956 1442 ntBASIC11.69□□□□□ -0.54
RAB40CQ96S21 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
RAB40CQ96S21 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
RAB40CQ96S21 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC11.68□□□□□ -0.54
RAB40CQ96S21 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC11.68□□□□□ -0.54
RAB40CQ96S21 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
RAB40CQ96S21 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC11.68□□□□□ -0.54
RAB40CQ96S21 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC11.68□□□□□ -0.54
RAB40CQ96S21 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
RAB40CQ96S21 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC11.68□□□□□ -0.54
RAB40CQ96S21 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC11.68□□□□□ -0.54
RAB40CQ96S21 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
RAB40CQ96S21 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms