Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
UBE2E2Q96LR5 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC11.12□□□□□ -0.63
UBE2E2Q96LR5 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
UBE2E2Q96LR5 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2E2Q96LR5 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC11.12□□□□□ -0.63
UBE2E2Q96LR5 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC11.12□□□□□ -0.63
UBE2E2Q96LR5 LINC00552-201ENST00000625151 2579 ntBASIC11.12□□□□□ -0.63
UBE2E2Q96LR5 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2E2Q96LR5 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
UBE2E2Q96LR5 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC11.12□□□□□ -0.63
UBE2E2Q96LR5 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2E2Q96LR5 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC11.12□□□□□ -0.63
UBE2E2Q96LR5 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 GSN-203ENST00000373808 2664 ntTSL 2 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 USP17L6P-201ENST00000382470 1197 ntBASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 RN7SL277P-201ENST00000481521 288 ntBASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 AC114947.1-202ENST00000514136 344 ntBASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 AL512310.5-201ENST00000551999 515 ntBASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 FGFR3P5-201ENST00000564496 886 ntBASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 AC026803.1-201ENST00000569130 274 ntBASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 PHBP15-201ENST00000574228 665 ntBASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 AC012044.1-201ENST00000603431 297 ntBASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
UBE2E2Q96LR5 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBE2E2Q96LR5 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
UBE2E2Q96LR5 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC11.1□□□□□ -0.63
UBE2E2Q96LR5 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
UBE2E2Q96LR5 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC11.1□□□□□ -0.63
UBE2E2Q96LR5 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBE2E2Q96LR5 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC11.1□□□□□ -0.63
UBE2E2Q96LR5 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBE2E2Q96LR5 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
UBE2E2Q96LR5 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBE2E2Q96LR5 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBE2E2Q96LR5 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC11.1□□□□□ -0.63
UBE2E2Q96LR5 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.1□□□□□ -0.63
UBE2E2Q96LR5 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
UBE2E2Q96LR5 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
UBE2E2Q96LR5 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
UBE2E2Q96LR5 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
UBE2E2Q96LR5 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
UBE2E2Q96LR5 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
UBE2E2Q96LR5 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC11.1□□□□□ -0.63
UBE2E2Q96LR5 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
UBE2E2Q96LR5 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms