Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABPAQ06546 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
GABPAQ06546 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
GABPAQ06546 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC16.65■□□□□ 0.26
GABPAQ06546 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABPAQ06546 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
GABPAQ06546 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.65■□□□□ 0.26
GABPAQ06546 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GABPAQ06546 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.65■□□□□ 0.26
GABPAQ06546 BUD31-205ENST00000456893 512 ntTSL 5 BASIC16.65■□□□□ 0.26
GABPAQ06546 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
GABPAQ06546 IGHV1-12-201ENST00000518307 205 ntBASIC16.65■□□□□ 0.26
GABPAQ06546 RN7SL357P-201ENST00000581065 298 ntBASIC16.65■□□□□ 0.26
GABPAQ06546 MIR4265-201ENST00000582152 99 ntBASIC16.65■□□□□ 0.26
GABPAQ06546 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.65■□□□□ 0.26
GABPAQ06546 DBP-202ENST00000593500 712 ntTSL 2 BASIC16.65■□□□□ 0.26
GABPAQ06546 HPX-213ENST00000615166 826 ntTSL 5 BASIC16.65■□□□□ 0.26
GABPAQ06546 LINC02228-204ENST00000642115 2962 ntBASIC16.65■□□□□ 0.26
GABPAQ06546 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABPAQ06546 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABPAQ06546 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GABPAQ06546 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABPAQ06546 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.65■□□□□ 0.26
GABPAQ06546 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABPAQ06546 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABPAQ06546 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.65■□□□□ 0.26
GABPAQ06546 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.65■□□□□ 0.26
GABPAQ06546 PDXDC2P-206ENST00000534700 1315 ntBASIC16.65■□□□□ 0.26
GABPAQ06546 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
GABPAQ06546 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GABPAQ06546 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GABPAQ06546 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC16.65■□□□□ 0.26
GABPAQ06546 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC16.65■□□□□ 0.26
GABPAQ06546 CICP16-201ENST00000502609 2813 ntBASIC16.65■□□□□ 0.26
GABPAQ06546 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
GABPAQ06546 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
GABPAQ06546 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
GABPAQ06546 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABPAQ06546 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
GABPAQ06546 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
GABPAQ06546 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
GABPAQ06546 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABPAQ06546 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABPAQ06546 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.64■□□□□ 0.25
GABPAQ06546 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABPAQ06546 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GABPAQ06546 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABPAQ06546 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GABPAQ06546 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.64■□□□□ 0.25
GABPAQ06546 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABPAQ06546 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GABPAQ06546 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABPAQ06546 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABPAQ06546 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
GABPAQ06546 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC16.64■□□□□ 0.25
GABPAQ06546 AL627389.1-201ENST00000413508 1182 ntBASIC16.64■□□□□ 0.25
GABPAQ06546 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GABPAQ06546 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC16.64■□□□□ 0.25
GABPAQ06546 AC012362.1-201ENST00000434906 739 ntBASIC16.64■□□□□ 0.25
GABPAQ06546 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.64■□□□□ 0.25
GABPAQ06546 RN7SL767P-201ENST00000493013 295 ntBASIC16.64■□□□□ 0.25
GABPAQ06546 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.64■□□□□ 0.25
GABPAQ06546 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.64■□□□□ 0.25
GABPAQ06546 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
GABPAQ06546 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.64■□□□□ 0.25
GABPAQ06546 KRT8P2-201ENST00000556193 944 ntBASIC16.64■□□□□ 0.25
GABPAQ06546 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC16.64■□□□□ 0.25
GABPAQ06546 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.64■□□□□ 0.25
GABPAQ06546 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABPAQ06546 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
GABPAQ06546 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABPAQ06546 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
GABPAQ06546 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABPAQ06546 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABPAQ06546 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
GABPAQ06546 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.64■□□□□ 0.25
GABPAQ06546 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GABPAQ06546 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GABPAQ06546 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.64■□□□□ 0.25
GABPAQ06546 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GABPAQ06546 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
GABPAQ06546 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
GABPAQ06546 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GABPAQ06546 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GABPAQ06546 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
GABPAQ06546 ODCP-201ENST00000459650 1639 ntBASIC16.63■□□□□ 0.25
GABPAQ06546 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
GABPAQ06546 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.63■□□□□ 0.25
GABPAQ06546 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GABPAQ06546 AC007686.3-201ENST00000619017 3487 ntBASIC16.63■□□□□ 0.25
GABPAQ06546 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GABPAQ06546 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GABPAQ06546 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GABPAQ06546 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GABPAQ06546 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.63■□□□□ 0.25
GABPAQ06546 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GABPAQ06546 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GABPAQ06546 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC16.63■□□□□ 0.25
GABPAQ06546 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.63■□□□□ 0.25
GABPAQ06546 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms