Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
HIST1H3AP68431 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
HIST1H3AP68431 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
HIST1H3AP68431 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.54□□□□□ -0.4
HIST1H3AP68431 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H3AP68431 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.54□□□□□ -0.4
HIST1H3AP68431 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.54□□□□□ -0.4
HIST1H3AP68431 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 POM121L10P-201ENST00000436994 1285 ntBASIC12.54□□□□□ -0.4
HIST1H3AP68431 AL591846.1-201ENST00000451736 433 ntBASIC12.54□□□□□ -0.4
HIST1H3AP68431 RNMTL1P1-201ENST00000454103 560 ntBASIC12.54□□□□□ -0.4
HIST1H3AP68431 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
HIST1H3AP68431 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.54□□□□□ -0.4
HIST1H3AP68431 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.54□□□□□ -0.4
HIST1H3AP68431 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.54□□□□□ -0.4
HIST1H3AP68431 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H3AP68431 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.54□□□□□ -0.4
HIST1H3AP68431 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H3AP68431 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.54□□□□□ -0.4
HIST1H3AP68431 AC008805.1-201ENST00000590892 364 ntBASIC12.54□□□□□ -0.4
HIST1H3AP68431 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC12.54□□□□□ -0.4
HIST1H3AP68431 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 AC068587.8-201ENST00000641239 219 ntBASIC12.54□□□□□ -0.4
HIST1H3AP68431 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 AP002353.1-201ENST00000528257 1599 ntBASIC12.54□□□□□ -0.4
HIST1H3AP68431 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
HIST1H3AP68431 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
HIST1H3AP68431 AC130686.1-201ENST00000622936 2466 ntBASIC12.54□□□□□ -0.4
HIST1H3AP68431 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H3AP68431 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H3AP68431 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H3AP68431 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.54□□□□□ -0.4
HIST1H3AP68431 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
HIST1H3AP68431 AC004899.1-201ENST00000424687 1714 ntBASIC12.54□□□□□ -0.4
HIST1H3AP68431 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.53□□□□□ -0.4
HIST1H3AP68431 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.53□□□□□ -0.4
HIST1H3AP68431 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
HIST1H3AP68431 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.53□□□□□ -0.4
HIST1H3AP68431 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.53□□□□□ -0.4
HIST1H3AP68431 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
HIST1H3AP68431 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
HIST1H3AP68431 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.53□□□□□ -0.4
HIST1H3AP68431 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 HMGA1P1-201ENST00000415560 1062 ntBASIC12.53□□□□□ -0.4
HIST1H3AP68431 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 ATP5G2P4-201ENST00000442175 420 ntBASIC12.53□□□□□ -0.4
HIST1H3AP68431 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.53□□□□□ -0.4
HIST1H3AP68431 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.53□□□□□ -0.4
HIST1H3AP68431 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
HIST1H3AP68431 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.53□□□□□ -0.4
HIST1H3AP68431 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.53□□□□□ -0.4
HIST1H3AP68431 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HIST1H3AP68431 AC089987.1-201ENST00000551654 2209 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms