Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.51□□□□□ -0.41
UBA52P62987 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.51□□□□□ -0.41
UBA52P62987 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UBA52P62987 TPI1-206ENST00000488464 791 ntTSL 5 BASIC12.51□□□□□ -0.41
UBA52P62987 DUX4L45-201ENST00000566406 1057 ntBASIC12.51□□□□□ -0.41
UBA52P62987 AC000095.1-201ENST00000603208 874 ntBASIC12.51□□□□□ -0.41
UBA52P62987 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.51□□□□□ -0.41
UBA52P62987 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.51□□□□□ -0.41
UBA52P62987 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.51□□□□□ -0.41
UBA52P62987 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.51□□□□□ -0.41
UBA52P62987 PCDHB18P-202ENST00000526308 3197 ntBASIC12.51□□□□□ -0.41
UBA52P62987 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
UBA52P62987 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.51□□□□□ -0.41
UBA52P62987 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBA52P62987 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBA52P62987 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
UBA52P62987 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBA52P62987 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UBA52P62987 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBA52P62987 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBA52P62987 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBA52P62987 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBA52P62987 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UBA52P62987 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBA52P62987 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UBA52P62987 AC007787.1-201ENST00000588095 1583 ntBASIC12.51□□□□□ -0.41
UBA52P62987 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.51□□□□□ -0.41
UBA52P62987 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBA52P62987 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.51□□□□□ -0.41
UBA52P62987 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UBA52P62987 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
UBA52P62987 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.51□□□□□ -0.41
UBA52P62987 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.51□□□□□ -0.41
UBA52P62987 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.51□□□□□ -0.41
UBA52P62987 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UBA52P62987 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.51□□□□□ -0.41
UBA52P62987 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.5□□□□□ -0.41
UBA52P62987 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
UBA52P62987 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.5□□□□□ -0.41
UBA52P62987 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.5□□□□□ -0.41
UBA52P62987 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
UBA52P62987 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
UBA52P62987 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.5□□□□□ -0.41
UBA52P62987 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
UBA52P62987 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.5□□□□□ -0.41
UBA52P62987 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.5□□□□□ -0.41
UBA52P62987 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.5□□□□□ -0.41
UBA52P62987 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC12.5□□□□□ -0.41
UBA52P62987 GOLGA2P4-201ENST00000441462 777 ntBASIC12.5□□□□□ -0.41
UBA52P62987 AC022137.2-201ENST00000503482 481 ntBASIC12.5□□□□□ -0.41
UBA52P62987 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.5□□□□□ -0.41
UBA52P62987 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
UBA52P62987 AC023310.1-201ENST00000554836 735 ntBASIC12.5□□□□□ -0.41
UBA52P62987 HNRNPUP1-201ENST00000554987 333 ntBASIC12.5□□□□□ -0.41
UBA52P62987 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC12.5□□□□□ -0.41
UBA52P62987 AL139099.5-201ENST00000635274 300 ntBASIC12.5□□□□□ -0.41
UBA52P62987 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.5□□□□□ -0.41
UBA52P62987 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
UBA52P62987 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.5□□□□□ -0.41
UBA52P62987 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.5□□□□□ -0.41
UBA52P62987 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.5□□□□□ -0.41
UBA52P62987 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
UBA52P62987 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.5□□□□□ -0.41
UBA52P62987 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
UBA52P62987 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.5□□□□□ -0.41
UBA52P62987 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
UBA52P62987 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
UBA52P62987 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 MIR497HG-202ENST00000572453 3838 ntBASIC12.5□□□□□ -0.41
UBA52P62987 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UBA52P62987 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBA52P62987 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBA52P62987 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBA52P62987 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms