Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
WNT3AP56704 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
WNT3AP56704 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
WNT3AP56704 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
WNT3AP56704 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
WNT3AP56704 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
WNT3AP56704 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.48□□□□□ -0.09
WNT3AP56704 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
WNT3AP56704 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
WNT3AP56704 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
WNT3AP56704 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.48□□□□□ -0.09
WNT3AP56704 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
WNT3AP56704 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
WNT3AP56704 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.48□□□□□ -0.09
WNT3AP56704 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.48□□□□□ -0.09
WNT3AP56704 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
WNT3AP56704 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.48□□□□□ -0.09
WNT3AP56704 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.48□□□□□ -0.09
WNT3AP56704 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
WNT3AP56704 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.48□□□□□ -0.09
WNT3AP56704 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
WNT3AP56704 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.48□□□□□ -0.09
WNT3AP56704 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
WNT3AP56704 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.48□□□□□ -0.09
WNT3AP56704 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.48□□□□□ -0.09
WNT3AP56704 AL157813.1-201ENST00000612996 587 ntBASIC14.48□□□□□ -0.09
WNT3AP56704 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.48□□□□□ -0.09
WNT3AP56704 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
WNT3AP56704 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
WNT3AP56704 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.48□□□□□ -0.09
WNT3AP56704 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
WNT3AP56704 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
WNT3AP56704 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
WNT3AP56704 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
WNT3AP56704 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
WNT3AP56704 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
WNT3AP56704 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
WNT3AP56704 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
WNT3AP56704 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.48□□□□□ -0.09
WNT3AP56704 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
WNT3AP56704 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.48□□□□□ -0.09
WNT3AP56704 AL928654.5-201ENST00000624831 2501 ntBASIC14.48□□□□□ -0.09
WNT3AP56704 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
WNT3AP56704 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.48□□□□□ -0.09
WNT3AP56704 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.48□□□□□ -0.09
WNT3AP56704 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
WNT3AP56704 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
WNT3AP56704 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.48□□□□□ -0.09
WNT3AP56704 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
WNT3AP56704 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
WNT3AP56704 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.47□□□□□ -0.09
WNT3AP56704 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
WNT3AP56704 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
WNT3AP56704 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
WNT3AP56704 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 LINC00115-201ENST00000473798 1317 ntBASIC14.47□□□□□ -0.09
WNT3AP56704 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
WNT3AP56704 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.47□□□□□ -0.09
WNT3AP56704 AC004898.1-201ENST00000451057 766 ntBASIC14.47□□□□□ -0.09
WNT3AP56704 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.47□□□□□ -0.09
WNT3AP56704 MARK2P5-201ENST00000507649 634 ntBASIC14.47□□□□□ -0.09
WNT3AP56704 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.47□□□□□ -0.09
WNT3AP56704 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.47□□□□□ -0.09
WNT3AP56704 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
WNT3AP56704 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.47□□□□□ -0.09
WNT3AP56704 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.47□□□□□ -0.09
WNT3AP56704 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.47□□□□□ -0.09
WNT3AP56704 AL022328.3-201ENST00000607943 679 ntBASIC14.47□□□□□ -0.09
WNT3AP56704 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.47□□□□□ -0.09
WNT3AP56704 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.47□□□□□ -0.09
WNT3AP56704 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.47□□□□□ -0.09
WNT3AP56704 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.47□□□□□ -0.09
WNT3AP56704 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.47□□□□□ -0.09
WNT3AP56704 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
WNT3AP56704 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
WNT3AP56704 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms