Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AC040160.2-201ENST00000623816 1675 ntBASIC24.56■■□□□ 1.52
SMARCA4P51532 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMARCA4P51532 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMARCA4P51532 AC092384.3-202ENST00000564646 2873 ntBASIC24.56■■□□□ 1.52
SMARCA4P51532 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC24.56■■□□□ 1.52
SMARCA4P51532 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMARCA4P51532 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMARCA4P51532 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMARCA4P51532 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC24.56■■□□□ 1.52
SMARCA4P51532 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC24.56■■□□□ 1.52
SMARCA4P51532 AC245140.2-201ENST00000624054 1939 ntBASIC24.56■■□□□ 1.52
SMARCA4P51532 FES-204ENST00000414248 2327 ntTSL 2 BASIC24.56■■□□□ 1.52
SMARCA4P51532 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC24.56■■□□□ 1.52
SMARCA4P51532 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC24.56■■□□□ 1.52
SMARCA4P51532 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC24.56■■□□□ 1.52
SMARCA4P51532 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC24.56■■□□□ 1.52
SMARCA4P51532 RPSAP16-201ENST00000447583 821 ntBASIC24.56■■□□□ 1.52
SMARCA4P51532 YBX1P3-201ENST00000468366 909 ntBASIC24.56■■□□□ 1.52
SMARCA4P51532 KRT18P42-201ENST00000505048 1255 ntBASIC24.56■■□□□ 1.52
SMARCA4P51532 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC24.56■■□□□ 1.52
SMARCA4P51532 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC24.56■■□□□ 1.52
SMARCA4P51532 ABCD1P3-201ENST00000562927 605 ntBASIC24.56■■□□□ 1.52
SMARCA4P51532 AC084262.1-201ENST00000567818 751 ntBASIC24.56■■□□□ 1.52
SMARCA4P51532 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC24.56■■□□□ 1.52
SMARCA4P51532 COG6-212ENST00000630730 186 ntTSL 5 BASIC24.56■■□□□ 1.52
SMARCA4P51532 Z82244.2-201ENST00000632196 448 ntBASIC24.56■■□□□ 1.52
SMARCA4P51532 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMARCA4P51532 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
SMARCA4P51532 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SMARCA4P51532 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMARCA4P51532 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC24.55■■□□□ 1.52
SMARCA4P51532 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMARCA4P51532 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SMARCA4P51532 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
SMARCA4P51532 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMARCA4P51532 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMARCA4P51532 ALDOAP1-201ENST00000491506 1078 ntBASIC24.55■■□□□ 1.52
SMARCA4P51532 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SMARCA4P51532 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC24.55■■□□□ 1.52
SMARCA4P51532 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC24.55■■□□□ 1.52
SMARCA4P51532 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC24.55■■□□□ 1.52
SMARCA4P51532 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
SMARCA4P51532 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC24.55■■□□□ 1.52
SMARCA4P51532 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMARCA4P51532 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SMARCA4P51532 AP000437.1-201ENST00000624057 2085 ntBASIC24.55■■□□□ 1.52
SMARCA4P51532 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
SMARCA4P51532 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMARCA4P51532 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMARCA4P51532 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SMARCA4P51532 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SMARCA4P51532 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
SMARCA4P51532 SNORA50D-201ENST00000408059 134 ntBASIC24.54■■□□□ 1.52
SMARCA4P51532 MIR1226-201ENST00000408658 75 ntBASIC24.54■■□□□ 1.52
SMARCA4P51532 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC24.54■■□□□ 1.52
SMARCA4P51532 RBMX2P5-201ENST00000424312 969 ntBASIC24.54■■□□□ 1.52
SMARCA4P51532 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC24.54■■□□□ 1.52
SMARCA4P51532 AC012358.2-201ENST00000430010 1434 ntBASIC24.54■■□□□ 1.52
SMARCA4P51532 AC093106.1-201ENST00000437271 352 ntBASIC24.54■■□□□ 1.52
SMARCA4P51532 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC24.54■■□□□ 1.52
SMARCA4P51532 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
SMARCA4P51532 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
SMARCA4P51532 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC24.54■■□□□ 1.52
SMARCA4P51532 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
SMARCA4P51532 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC24.54■■□□□ 1.52
SMARCA4P51532 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
SMARCA4P51532 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
SMARCA4P51532 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SMARCA4P51532 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC24.54■■□□□ 1.52
SMARCA4P51532 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SMARCA4P51532 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC24.53■■□□□ 1.52
SMARCA4P51532 AL161727.1-201ENST00000457409 530 ntBASIC24.53■■□□□ 1.52
SMARCA4P51532 RN7SL838P-201ENST00000481676 295 ntBASIC24.53■■□□□ 1.52
SMARCA4P51532 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC24.53■■□□□ 1.52
SMARCA4P51532 AP000553.2-201ENST00000609038 441 ntBASIC24.53■■□□□ 1.52
SMARCA4P51532 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC24.53■■□□□ 1.52
SMARCA4P51532 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC24.53■■□□□ 1.52
SMARCA4P51532 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC24.53■■□□□ 1.52
SMARCA4P51532 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SMARCA4P51532 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC24.53■■□□□ 1.52
SMARCA4P51532 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SMARCA4P51532 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SMARCA4P51532 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC24.53■■□□□ 1.52
SMARCA4P51532 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SMARCA4P51532 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
SMARCA4P51532 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SMARCA4P51532 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SMARCA4P51532 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC24.53■■□□□ 1.52
SMARCA4P51532 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SMARCA4P51532 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC24.53■■□□□ 1.52
SMARCA4P51532 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SMARCA4P51532 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC24.53■■□□□ 1.52
SMARCA4P51532 AC002350.2-201ENST00000623894 1828 ntBASIC24.53■■□□□ 1.52
SMARCA4P51532 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC24.53■■□□□ 1.52
SMARCA4P51532 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC24.53■■□□□ 1.52
SMARCA4P51532 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SMARCA4P51532 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC24.53■■□□□ 1.52
SMARCA4P51532 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC24.53■■□□□ 1.52
SMARCA4P51532 HMGA1P2-201ENST00000430198 324 ntBASIC24.53■■□□□ 1.52
SMARCA4P51532 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC24.53■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms