Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 PPT1-213ENST00000641319 2388 ntBASIC15.16■□□□□ 0.02
TUBP50607 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.16■□□□□ 0.02
TUBP50607 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TUBP50607 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBP50607 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.16■□□□□ 0.02
TUBP50607 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBP50607 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.16■□□□□ 0.02
TUBP50607 AC007274.2-201ENST00000421675 662 ntBASIC15.16■□□□□ 0.02
TUBP50607 PDIA3P2-201ENST00000428073 158 ntBASIC15.16■□□□□ 0.02
TUBP50607 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.16■□□□□ 0.02
TUBP50607 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBP50607 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC15.16■□□□□ 0.02
TUBP50607 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.16■□□□□ 0.02
TUBP50607 RNA5SP423-201ENST00000517127 109 ntBASIC15.16■□□□□ 0.02
TUBP50607 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.16■□□□□ 0.02
TUBP50607 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.16■□□□□ 0.02
TUBP50607 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBP50607 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.16■□□□□ 0.02
TUBP50607 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.16■□□□□ 0.02
TUBP50607 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.16■□□□□ 0.02
TUBP50607 AC124068.2-201ENST00000569473 1109 ntBASIC15.16■□□□□ 0.02
TUBP50607 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.16■□□□□ 0.02
TUBP50607 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.16■□□□□ 0.02
TUBP50607 MIR6074-201ENST00000612054 107 ntBASIC15.16■□□□□ 0.02
TUBP50607 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.16■□□□□ 0.02
TUBP50607 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBP50607 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TUBP50607 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TUBP50607 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.16■□□□□ 0.02
TUBP50607 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBP50607 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TUBP50607 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBP50607 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TUBP50607 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBP50607 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBP50607 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBP50607 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBP50607 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TUBP50607 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.16■□□□□ 0.02
TUBP50607 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TUBP50607 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TUBP50607 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBP50607 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBP50607 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBP50607 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBP50607 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
TUBP50607 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.15■□□□□ 0.02
TUBP50607 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBP50607 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBP50607 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBP50607 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBP50607 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TUBP50607 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBP50607 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TUBP50607 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBP50607 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBP50607 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TUBP50607 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TUBP50607 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBP50607 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TUBP50607 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.15■□□□□ 0.02
TUBP50607 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.15■□□□□ 0.02
TUBP50607 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBP50607 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TUBP50607 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.15■□□□□ 0.02
TUBP50607 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.15■□□□□ 0.02
TUBP50607 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBP50607 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
TUBP50607 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TUBP50607 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.15■□□□□ 0.02
TUBP50607 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.15■□□□□ 0.02
TUBP50607 IMP3P2-201ENST00000489760 475 ntBASIC15.15■□□□□ 0.02
TUBP50607 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.15■□□□□ 0.02
TUBP50607 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.15■□□□□ 0.02
TUBP50607 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBP50607 MIR4754-201ENST00000582477 89 ntBASIC15.15■□□□□ 0.02
TUBP50607 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.15■□□□□ 0.02
TUBP50607 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.15■□□□□ 0.02
TUBP50607 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.15■□□□□ 0.02
TUBP50607 AC020922.3-201ENST00000595064 547 ntBASIC15.15■□□□□ 0.02
TUBP50607 AC015967.2-201ENST00000624092 234 ntBASIC15.15■□□□□ 0.02
TUBP50607 AC006435.4-201ENST00000625037 234 ntBASIC15.15■□□□□ 0.02
TUBP50607 AC092299.1-201ENST00000632679 757 ntBASIC15.15■□□□□ 0.02
TUBP50607 AL356737.1-201ENST00000634391 234 ntBASIC15.15■□□□□ 0.02
TUBP50607 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBP50607 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBP50607 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBP50607 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBP50607 AC215219.1-201ENST00000400706 1817 ntBASIC15.15■□□□□ 0.02
TUBP50607 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TUBP50607 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TUBP50607 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TUBP50607 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TUBP50607 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TUBP50607 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBP50607 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBP50607 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TUBP50607 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TUBP50607 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.14■□□□□ 0.01
TUBP50607 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms