Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 HNRNPA3P1-201ENST00000401429 1139 ntBASIC11.81□□□□□ -0.52
NKX2-1P43699 KLF2P2-201ENST00000416807 1039 ntBASIC11.81□□□□□ -0.52
NKX2-1P43699 HNRNPA3P5-201ENST00000455201 833 ntBASIC11.81□□□□□ -0.52
NKX2-1P43699 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
NKX2-1P43699 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC11.81□□□□□ -0.52
NKX2-1P43699 AC109322.1-201ENST00000524499 1264 ntBASIC11.81□□□□□ -0.52
NKX2-1P43699 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC11.81□□□□□ -0.52
NKX2-1P43699 AP001582.1-201ENST00000525856 295 ntBASIC11.81□□□□□ -0.52
NKX2-1P43699 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-1P43699 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC11.81□□□□□ -0.52
NKX2-1P43699 LSM12-202ENST00000585388 942 ntTSL 3 BASIC11.81□□□□□ -0.52
NKX2-1P43699 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC11.81□□□□□ -0.52
NKX2-1P43699 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-1P43699 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-1P43699 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-1P43699 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-1P43699 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-1P43699 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
NKX2-1P43699 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
NKX2-1P43699 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-1P43699 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
NKX2-1P43699 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
NKX2-1P43699 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-1P43699 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-1P43699 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-1P43699 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-1P43699 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
NKX2-1P43699 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NKX2-1P43699 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC11.8□□□□□ -0.52
NKX2-1P43699 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
NKX2-1P43699 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 USP31-203ENST00000567975 2142 ntTSL 2 BASIC11.8□□□□□ -0.52
NKX2-1P43699 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
NKX2-1P43699 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 GOLGA8EP-201ENST00000530246 1959 ntBASIC11.8□□□□□ -0.52
NKX2-1P43699 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC11.8□□□□□ -0.52
NKX2-1P43699 AL359845.1-201ENST00000458202 1648 ntBASIC11.8□□□□□ -0.52
NKX2-1P43699 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC11.8□□□□□ -0.52
NKX2-1P43699 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
NKX2-1P43699 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC11.8□□□□□ -0.52
NKX2-1P43699 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC11.8□□□□□ -0.52
NKX2-1P43699 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 URGCP-206ENST00000446958 365 ntTSL 2 BASIC11.8□□□□□ -0.52
NKX2-1P43699 FO681548.1-201ENST00000455617 1132 ntBASIC11.8□□□□□ -0.52
NKX2-1P43699 AC125807.1-201ENST00000483097 614 ntBASIC11.8□□□□□ -0.52
NKX2-1P43699 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC11.8□□□□□ -0.52
NKX2-1P43699 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC11.8□□□□□ -0.52
NKX2-1P43699 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC11.8□□□□□ -0.52
NKX2-1P43699 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC11.8□□□□□ -0.52
NKX2-1P43699 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC11.8□□□□□ -0.52
NKX2-1P43699 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC11.8□□□□□ -0.52
NKX2-1P43699 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC11.8□□□□□ -0.52
NKX2-1P43699 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC11.8□□□□□ -0.52
NKX2-1P43699 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC11.8□□□□□ -0.52
NKX2-1P43699 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
NKX2-1P43699 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC11.8□□□□□ -0.52
NKX2-1P43699 AC027237.1-201ENST00000560942 655 ntBASIC11.8□□□□□ -0.52
NKX2-1P43699 AC005586.2-201ENST00000563946 837 ntBASIC11.8□□□□□ -0.52
NKX2-1P43699 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
NKX2-1P43699 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC11.8□□□□□ -0.52
NKX2-1P43699 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
NKX2-1P43699 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC11.8□□□□□ -0.52
NKX2-1P43699 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
NKX2-1P43699 Z92544.3-201ENST00000624747 417 ntBASIC11.8□□□□□ -0.52
NKX2-1P43699 AC004840.1-201ENST00000636359 365 ntBASIC11.8□□□□□ -0.52
NKX2-1P43699 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
NKX2-1P43699 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
NKX2-1P43699 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
NKX2-1P43699 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC11.8□□□□□ -0.52
NKX2-1P43699 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NKX2-1P43699 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
NKX2-1P43699 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms