Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.97□□□□□ -0.01
MTHFRP42898 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.97□□□□□ -0.01
MTHFRP42898 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
MTHFRP42898 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MTHFRP42898 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
MTHFRP42898 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MTHFRP42898 AGGF1P1-201ENST00000509500 2073 ntBASIC14.97□□□□□ -0.01
MTHFRP42898 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MTHFRP42898 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.97□□□□□ -0.01
MTHFRP42898 AC097376.2-205ENST00000610159 5334 ntBASIC14.97□□□□□ -0.01
MTHFRP42898 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
MTHFRP42898 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MTHFRP42898 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MTHFRP42898 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MTHFRP42898 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MTHFRP42898 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MTHFRP42898 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MTHFRP42898 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MTHFRP42898 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MTHFRP42898 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MTHFRP42898 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MTHFRP42898 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
MTHFRP42898 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MTHFRP42898 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
MTHFRP42898 AC025183.3-201ENST00000623526 1482 ntBASIC14.96□□□□□ -0.01
MTHFRP42898 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MTHFRP42898 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC14.96□□□□□ -0.01
MTHFRP42898 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MTHFRP42898 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
MTHFRP42898 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.96□□□□□ -0.01
MTHFRP42898 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
MTHFRP42898 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MTHFRP42898 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
MTHFRP42898 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MTHFRP42898 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.96□□□□□ -0.01
MTHFRP42898 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MTHFRP42898 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
MTHFRP42898 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MTHFRP42898 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MTHFRP42898 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MTHFRP42898 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MTHFRP42898 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
MTHFRP42898 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.96□□□□□ -0.01
MTHFRP42898 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.01
MTHFRP42898 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC14.96□□□□□ -0.01
MTHFRP42898 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MTHFRP42898 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MTHFRP42898 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MTHFRP42898 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC14.96□□□□□ -0.01
MTHFRP42898 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.96□□□□□ -0.01
MTHFRP42898 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.96□□□□□ -0.01
MTHFRP42898 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.96□□□□□ -0.01
MTHFRP42898 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC14.96□□□□□ -0.01
MTHFRP42898 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC14.96□□□□□ -0.01
MTHFRP42898 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.96□□□□□ -0.01
MTHFRP42898 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC14.96□□□□□ -0.01
MTHFRP42898 AL118522.1-201ENST00000611368 560 ntBASIC14.96□□□□□ -0.01
MTHFRP42898 HMGB1P24-201ENST00000611897 328 ntBASIC14.96□□□□□ -0.01
MTHFRP42898 AC148477.9-201ENST00000623974 539 ntBASIC14.96□□□□□ -0.01
MTHFRP42898 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MTHFRP42898 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MTHFRP42898 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.96□□□□□ -0.01
MTHFRP42898 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MTHFRP42898 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.96□□□□□ -0.01
MTHFRP42898 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.96□□□□□ -0.01
MTHFRP42898 AC139749.1-202ENST00000617529 3139 ntBASIC14.96□□□□□ -0.02
MTHFRP42898 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
MTHFRP42898 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
MTHFRP42898 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
MTHFRP42898 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
MTHFRP42898 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.96□□□□□ -0.02
MTHFRP42898 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.96□□□□□ -0.02
MTHFRP42898 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MTHFRP42898 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MTHFRP42898 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
MTHFRP42898 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
MTHFRP42898 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.95□□□□□ -0.02
MTHFRP42898 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
MTHFRP42898 AL390755.1-201ENST00000623716 2027 ntBASIC14.95□□□□□ -0.02
MTHFRP42898 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MTHFRP42898 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
MTHFRP42898 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MTHFRP42898 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.95□□□□□ -0.02
MTHFRP42898 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MTHFRP42898 AL672207.1-201ENST00000328462 1570 ntBASIC14.95□□□□□ -0.02
MTHFRP42898 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.95□□□□□ -0.02
MTHFRP42898 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MTHFRP42898 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MTHFRP42898 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
MTHFRP42898 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.95□□□□□ -0.02
MTHFRP42898 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
MTHFRP42898 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC14.95□□□□□ -0.02
MTHFRP42898 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC14.95□□□□□ -0.02
MTHFRP42898 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.95□□□□□ -0.02
MTHFRP42898 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC14.95□□□□□ -0.02
MTHFRP42898 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC14.95□□□□□ -0.02
MTHFRP42898 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.95□□□□□ -0.02
MTHFRP42898 NDUFB10P1-201ENST00000567319 521 ntBASIC14.95□□□□□ -0.02
MTHFRP42898 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.95□□□□□ -0.02
MTHFRP42898 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms