Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
CPS1P31327 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPS1P31327 AL031590.1-202ENST00000641466 1737 ntBASIC19.58■□□□□ 0.72
CPS1P31327 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPS1P31327 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPS1P31327 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC19.58■□□□□ 0.72
CPS1P31327 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CPS1P31327 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CPS1P31327 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPS1P31327 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CPS1P31327 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC19.57■□□□□ 0.72
CPS1P31327 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC19.57■□□□□ 0.72
CPS1P31327 AC104117.4-201ENST00000521486 847 ntBASIC19.57■□□□□ 0.72
CPS1P31327 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC19.57■□□□□ 0.72
CPS1P31327 METTL7AP1-201ENST00000547343 496 ntBASIC19.57■□□□□ 0.72
CPS1P31327 MIR5091-201ENST00000578707 93 ntBASIC19.57■□□□□ 0.72
CPS1P31327 AL031768.1-201ENST00000606542 701 ntBASIC19.57■□□□□ 0.72
CPS1P31327 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC19.57■□□□□ 0.72
CPS1P31327 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CPS1P31327 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC19.57■□□□□ 0.72
CPS1P31327 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CPS1P31327 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPS1P31327 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CPS1P31327 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CPS1P31327 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CPS1P31327 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CPS1P31327 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC19.57■□□□□ 0.72
CPS1P31327 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CPS1P31327 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CPS1P31327 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC19.56■□□□□ 0.72
CPS1P31327 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPS1P31327 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPS1P31327 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPS1P31327 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPS1P31327 HMGA1P1-201ENST00000415560 1062 ntBASIC19.56■□□□□ 0.72
CPS1P31327 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC19.56■□□□□ 0.72
CPS1P31327 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPS1P31327 SRP9P1-201ENST00000445874 261 ntBASIC19.56■□□□□ 0.72
CPS1P31327 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CPS1P31327 POR-201ENST00000394893 2532 ntTSL 5 BASIC19.56■□□□□ 0.72
CPS1P31327 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPS1P31327 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPS1P31327 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPS1P31327 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPS1P31327 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CPS1P31327 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPS1P31327 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPS1P31327 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC19.56■□□□□ 0.72
CPS1P31327 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPS1P31327 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPS1P31327 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPS1P31327 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPS1P31327 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CPS1P31327 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPS1P31327 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CPS1P31327 AC023824.1-201ENST00000562945 2975 ntBASIC19.56■□□□□ 0.72
CPS1P31327 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC19.56■□□□□ 0.72
CPS1P31327 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CPS1P31327 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC19.56■□□□□ 0.72
CPS1P31327 CD37-203ENST00000426897 1204 ntTSL 2 BASIC19.56■□□□□ 0.72
CPS1P31327 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC19.56■□□□□ 0.72
CPS1P31327 DUX4L31-201ENST00000446466 1136 ntBASIC19.56■□□□□ 0.72
CPS1P31327 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC19.56■□□□□ 0.72
CPS1P31327 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC19.56■□□□□ 0.72
CPS1P31327 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPS1P31327 GARS-210ENST00000627489 324 ntTSL 4 BASIC19.56■□□□□ 0.72
CPS1P31327 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.56■□□□□ 0.72
CPS1P31327 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CPS1P31327 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CPS1P31327 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CPS1P31327 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPS1P31327 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPS1P31327 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CPS1P31327 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CPS1P31327 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPS1P31327 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPS1P31327 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CPS1P31327 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CPS1P31327 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CPS1P31327 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.55■□□□□ 0.72
CPS1P31327 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPS1P31327 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPS1P31327 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPS1P31327 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPS1P31327 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPS1P31327 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC19.55■□□□□ 0.72
CPS1P31327 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC19.55■□□□□ 0.72
CPS1P31327 PCTP-206ENST00000573500 919 ntTSL 3 BASIC19.55■□□□□ 0.72
CPS1P31327 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC19.55■□□□□ 0.72
CPS1P31327 MIR8071-1-201ENST00000616769 65 ntBASIC19.55■□□□□ 0.72
CPS1P31327 MIR8071-2-201ENST00000616772 65 ntBASIC19.55■□□□□ 0.72
CPS1P31327 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPS1P31327 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.55■□□□□ 0.72
CPS1P31327 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CPS1P31327 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPS1P31327 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CPS1P31327 FGD5P1-202ENST00000614866 2498 ntBASIC19.55■□□□□ 0.72
CPS1P31327 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPS1P31327 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CPS1P31327 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms