Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 KRT17P5-201ENST00000332088 839 ntBASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 AL512430.1-201ENST00000392575 860 ntBASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 AL627422.1-201ENST00000434104 580 ntBASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 RN7SL81P-201ENST00000493781 261 ntBASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 PARP8-206ENST00000503665 572 ntTSL 4 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 AC087392.5-201ENST00000612517 489 ntBASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 YRDCP1-201ENST00000621419 643 ntBASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 AC087386.2-201ENST00000623212 4637 ntBASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAB40ALP0C0E4 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 INTS4P1-203ENST00000641008 3683 ntBASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 AC092580.1-201ENST00000433998 658 ntBASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 NDUFS6P1-201ENST00000485187 316 ntBASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 SORD2P-201ENST00000558556 1069 ntBASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 LAP3P2-201ENST00000454686 1454 ntBASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms